==775458== Memcheck, a memory error detector ==775458== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==775458== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==775458== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithParticles -malloc_debug -malloc_dump -memory_info ==775458== Parent PID: 773799 ==775458== ==775458== ==775458== FILE DESCRIPTORS: 9 open (3 std) at exit. ==775458== Open file descriptor 12: ==775458== at 0xE94B26D: pipe (pipe.c:29) ==775458== by 0x18AE307D: ??? ==775458== by 0x140804CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==775458== by 0x105A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==775458== by 0x10541D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==775458== by 0xF236D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==775458== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==775458== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==775458== by 0x2E2B7A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==775458== by 0x2D93D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==775458== by 0x2DDD40: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==775458== by 0x2DDBE0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==775458== by 0x2DE277: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==775458== by 0x2D77F5: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==775458== ==775458== Open file descriptor 8: /dev/shm/open_mpi.0000 ==775458== at 0xE94FC0C: __open_nocancel (open64_nocancel.c:39) ==775458== by 0xE8D3BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==775458== by 0xE49F822: ??? ==775458== by 0xE49F96F: ??? ==775458== by 0x141256DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==775458== by 0x14125938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==775458== by 0x140DB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==775458== by 0x140802DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==775458== by 0x105A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==775458== by 0x10541D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==775458== by 0xF236D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==775458== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==775458== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==775458== by 0x2E2B7A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==775458== by 0x2D93D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==775458== by 0x2DDD40: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==775458== by 0x2DDBE0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==775458== by 0x2DE277: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==775458== by 0x2D77F5: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==775458== ==775458== Open file descriptor 115: ==775458== ==775458== ==775458== Open file descriptor 112: ==775458== ==775458== ==775458== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithParticles_valgrind.txt ==775458== ==775458== ==775458== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==775458== ==775458== ==775458== ==775458== HEAP SUMMARY: ==775458== in use at exit: 858,019 bytes in 12,113 blocks ==775458== total heap usage: 111,478 allocs, 99,365 frees, 1,550,598,768 bytes allocated ==775458== ==775458== LEAK SUMMARY: ==775458== definitely lost: 0 bytes in 0 blocks ==775458== indirectly lost: 0 bytes in 0 blocks ==775458== possibly lost: 0 bytes in 0 blocks ==775458== still reachable: 56 bytes in 3 blocks ==775458== suppressed: 857,963 bytes in 12,110 blocks ==775458== Reachable blocks (those to which a pointer was found) are not shown. ==775458== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==775458== ==775458== For lists of detected and suppressed errors, rerun with: -s ==775458== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)