==782425== Memcheck, a memory error detector ==782425== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==782425== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==782425== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningDeltaNotchSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==782425== Parent PID: 773799 ==782425== ==782425== ==782425== FILE DESCRIPTORS: 9 open (3 std) at exit. ==782425== Open file descriptor 12: ==782425== at 0xE82226D: pipe (pipe.c:29) ==782425== by 0x18AE307D: ??? ==782425== by 0x140804CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==782425== by 0x104BF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==782425== by 0x10458D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==782425== by 0xF14FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==782425== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==782425== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==782425== by 0x122C8C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==782425== by 0x11E4D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==782425== by 0x12078C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==782425== by 0x120687: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==782425== by 0x120C9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==782425== by 0x11CCD5: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==782425== ==782425== Open file descriptor 8: /dev/shm/open_mpi.0000 ==782425== at 0xE826C0C: __open_nocancel (open64_nocancel.c:39) ==782425== by 0xE7AABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==782425== by 0xE49F822: ??? ==782425== by 0xE49F96F: ??? ==782425== by 0x141256DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==782425== by 0x14125938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==782425== by 0x140DB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==782425== by 0x140802DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==782425== by 0x104BF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==782425== by 0x10458D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==782425== by 0xF14FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==782425== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==782425== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==782425== by 0x122C8C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==782425== by 0x11E4D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==782425== by 0x12078C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==782425== by 0x120687: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==782425== by 0x120C9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==782425== by 0x11CCD5: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==782425== ==782425== Open file descriptor 115: ==782425== ==782425== ==782425== Open file descriptor 112: ==782425== ==782425== ==782425== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningDeltaNotchSimulationsTutorial_valgrind.txt ==782425== ==782425== ==782425== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==782425== ==782425== ==782425== ==782425== HEAP SUMMARY: ==782425== in use at exit: 857,959 bytes in 12,109 blocks ==782425== total heap usage: 5,102,616 allocs, 5,090,507 frees, 1,978,157,946 bytes allocated ==782425== ==782425== LEAK SUMMARY: ==782425== definitely lost: 0 bytes in 0 blocks ==782425== indirectly lost: 0 bytes in 0 blocks ==782425== possibly lost: 0 bytes in 0 blocks ==782425== still reachable: 56 bytes in 3 blocks ==782425== suppressed: 857,903 bytes in 12,106 blocks ==782425== Reachable blocks (those to which a pointer was found) are not shown. ==782425== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==782425== ==782425== For lists of detected and suppressed errors, rerun with: -s ==782425== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)