==782466== Memcheck, a memory error detector ==782466== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==782466== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==782466== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningMeshBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==782466== Parent PID: 773799 ==782466== ==782466== ==782466== FILE DESCRIPTORS: 9 open (3 std) at exit. ==782466== Open file descriptor 12: ==782466== at 0xFCD726D: pipe (pipe.c:29) ==782466== by 0x18AE107D: ??? ==782466== by 0x1402F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==782466== by 0xF926418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==782466== by 0xF8BFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==782466== by 0xE593D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==782466== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==782466== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==782466== by 0x122229: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==782466== by 0x11D80D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==782466== by 0x11FD98: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==782466== by 0x11FC38: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==782466== by 0x1202CF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==782466== by 0x11BC35: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==782466== ==782466== Open file descriptor 8: /dev/shm/open_mpi.0000 ==782466== at 0xFCDBC0C: __open_nocancel (open64_nocancel.c:39) ==782466== by 0xFC5FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==782466== by 0xF81D822: ??? ==782466== by 0xF81D96F: ??? ==782466== by 0x140D46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==782466== by 0x140D4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==782466== by 0x1408A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==782466== by 0x1402F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==782466== by 0xF926418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==782466== by 0xF8BFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==782466== by 0xE593D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==782466== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==782466== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==782466== by 0x122229: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==782466== by 0x11D80D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==782466== by 0x11FD98: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==782466== by 0x11FC38: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==782466== by 0x1202CF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==782466== by 0x11BC35: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==782466== ==782466== Open file descriptor 115: ==782466== ==782466== ==782466== Open file descriptor 112: ==782466== ==782466== ==782466== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedSimulationsTutorial_valgrind.txt ==782466== ==782466== ==782466== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==782466== ==782466== ==782466== ==782466== HEAP SUMMARY: ==782466== in use at exit: 857,959 bytes in 12,109 blocks ==782466== total heap usage: 3,094,808 allocs, 3,082,699 frees, 2,459,761,097 bytes allocated ==782466== ==782466== LEAK SUMMARY: ==782466== definitely lost: 0 bytes in 0 blocks ==782466== indirectly lost: 0 bytes in 0 blocks ==782466== possibly lost: 0 bytes in 0 blocks ==782466== still reachable: 56 bytes in 3 blocks ==782466== suppressed: 857,903 bytes in 12,106 blocks ==782466== Reachable blocks (those to which a pointer was found) are not shown. ==782466== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==782466== ==782466== For lists of detected and suppressed errors, rerun with: -s ==782466== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)