==775104== Memcheck, a memory error detector ==775104== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==775104== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==775104== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==775104== Parent PID: 773799 ==775104== ==775104== ==775104== FILE DESCRIPTORS: 9 open (3 std) at exit. ==775104== Open file descriptor 12: ==775104== at 0x1007526D: pipe (pipe.c:29) ==775104== by 0x18AE107D: ??? ==775104== by 0x140334CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==775104== by 0xFCC2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==775104== by 0xFC5BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==775104== by 0xE92FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==775104== by 0xE807153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==775104== by 0xE8071A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==775104== by 0x12943D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==775104== by 0x124993: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==775104== by 0x126EA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==775104== by 0x126DA1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==775104== by 0x1273B5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==775104== by 0x123195: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==775104== ==775104== Open file descriptor 8: /dev/shm/open_mpi.0000 ==775104== at 0x10079C0C: __open_nocancel (open64_nocancel.c:39) ==775104== by 0xFFFDBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==775104== by 0xFBB9822: ??? ==775104== by 0xFBB996F: ??? ==775104== by 0x140D86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==775104== by 0x140D8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==775104== by 0x1408E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==775104== by 0x140332DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==775104== by 0xFCC2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==775104== by 0xFC5BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==775104== by 0xE92FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==775104== by 0xE807153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==775104== by 0xE8071A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==775104== by 0x12943D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==775104== by 0x124993: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==775104== by 0x126EA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==775104== by 0x126DA1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==775104== by 0x1273B5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==775104== by 0x123195: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==775104== ==775104== Open file descriptor 115: ==775104== ==775104== ==775104== Open file descriptor 112: ==775104== ==775104== ==775104== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticBoxDomainPdeModifier_valgrind.txt ==775104== ==775104== ==775104== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==775104== ==775104== ==775104== ==775104== HEAP SUMMARY: ==775104== in use at exit: 857,959 bytes in 12,109 blocks ==775104== total heap usage: 7,555,204 allocs, 7,543,095 frees, 2,379,067,171 bytes allocated ==775104== ==775104== LEAK SUMMARY: ==775104== definitely lost: 0 bytes in 0 blocks ==775104== indirectly lost: 0 bytes in 0 blocks ==775104== possibly lost: 0 bytes in 0 blocks ==775104== still reachable: 56 bytes in 3 blocks ==775104== suppressed: 857,903 bytes in 12,106 blocks ==775104== Reachable blocks (those to which a pointer was found) are not shown. ==775104== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==775104== ==775104== For lists of detected and suppressed errors, rerun with: -s ==775104== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)