==677733== Memcheck, a memory error detector ==677733== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==677733== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==677733== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellSrn -malloc_debug -malloc_dump -memory_info ==677733== Parent PID: 676588 ==677733== ==677733== ==677733== FILE DESCRIPTORS: 9 open (3 std) at exit. ==677733== Open file descriptor 12: ==677733== at 0xE41D26D: pipe (pipe.c:29) ==677733== by 0x18A1E07D: ??? ==677733== by 0x12F7D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==677733== by 0xE06C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==677733== by 0xE005D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==677733== by 0xCCCED38: PetscInitialize (pinit.c:924) ==677733== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==677733== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==677733== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==677733== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==677733== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==677733== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==677733== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==677733== by 0x113935: main (TestCellSrn.cpp:18) ==677733== ==677733== Open file descriptor 8: /dev/shm/open_mpi.0000 ==677733== at 0xE421C0C: __open_nocancel (open64_nocancel.c:39) ==677733== by 0xE3A5BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==677733== by 0xDF5E822: ??? ==677733== by 0xDF5E96F: ??? ==677733== by 0x130226DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==677733== by 0x13022938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==677733== by 0x12FD8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==677733== by 0x12F7D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==677733== by 0xE06C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==677733== by 0xE005D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==677733== by 0xCCCED38: PetscInitialize (pinit.c:924) ==677733== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==677733== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==677733== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==677733== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==677733== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==677733== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==677733== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==677733== by 0x113935: main (TestCellSrn.cpp:18) ==677733== ==677733== Open file descriptor 116: ==677733== ==677733== ==677733== Open file descriptor 112: ==677733== ==677733== ==677733== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellSrn_valgrind.txt ==677733== ==677733== ==677733== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==677733== ==677733== ==677733== ==677733== HEAP SUMMARY: ==677733== in use at exit: 835,692 bytes in 11,678 blocks ==677733== total heap usage: 71,173 allocs, 59,495 frees, 1,541,084,263 bytes allocated ==677733== ==677733== LEAK SUMMARY: ==677733== definitely lost: 0 bytes in 0 blocks ==677733== indirectly lost: 0 bytes in 0 blocks ==677733== possibly lost: 0 bytes in 0 blocks ==677733== still reachable: 120 bytes in 4 blocks ==677733== suppressed: 835,572 bytes in 11,674 blocks ==677733== Reachable blocks (those to which a pointer was found) are not shown. ==677733== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==677733== ==677733== For lists of detected and suppressed errors, rerun with: -s ==677733== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)