==692459== Memcheck, a memory error detector ==692459== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==692459== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==692459== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOffLatticeCryptProjectionSimulation -malloc_debug -malloc_dump -memory_info ==692459== Parent PID: 676588 ==692459== ==692459== ==692459== FILE DESCRIPTORS: 9 open (3 std) at exit. ==692459== Open file descriptor 12: ==692459== at 0x119D426D: pipe (pipe.c:29) ==692459== by 0x1A6E007D: ??? ==692459== by 0x158524CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==692459== by 0x111F5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692459== by 0x1118ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692459== by 0xFE57D38: PetscInitialize (pinit.c:924) ==692459== by 0xFD2F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==692459== by 0xFD2F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==692459== by 0x135AC5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==692459== by 0x12F30D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==692459== by 0x131D16: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==692459== by 0x131BB6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==692459== by 0x13224D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==692459== by 0x12D735: main (TestOffLatticeCryptProjectionSimulation.cpp:19) ==692459== ==692459== Open file descriptor 8: /dev/shm/open_mpi.0000 ==692459== at 0x119D8C0C: __open_nocancel (open64_nocancel.c:39) ==692459== by 0x1195CBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==692459== by 0x110E7822: ??? ==692459== by 0x110E796F: ??? ==692459== by 0x158F76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692459== by 0x158F7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692459== by 0x158AD922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692459== by 0x158522DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==692459== by 0x111F5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692459== by 0x1118ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692459== by 0xFE57D38: PetscInitialize (pinit.c:924) ==692459== by 0xFD2F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==692459== by 0xFD2F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==692459== by 0x135AC5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==692459== by 0x12F30D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==692459== by 0x131D16: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==692459== by 0x131BB6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==692459== by 0x13224D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==692459== by 0x12D735: main (TestOffLatticeCryptProjectionSimulation.cpp:19) ==692459== ==692459== Open file descriptor 116: ==692459== ==692459== ==692459== Open file descriptor 112: ==692459== ==692459== ==692459== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeCryptProjectionSimulation_valgrind.txt ==692459== ==692459== ==692459== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==692459== ==692459== ==692459== ==692459== HEAP SUMMARY: ==692459== in use at exit: 835,644 bytes in 11,677 blocks ==692459== total heap usage: 1,352,393 allocs, 1,340,716 frees, 1,654,918,737 bytes allocated ==692459== ==692459== LEAK SUMMARY: ==692459== definitely lost: 0 bytes in 0 blocks ==692459== indirectly lost: 0 bytes in 0 blocks ==692459== possibly lost: 0 bytes in 0 blocks ==692459== still reachable: 56 bytes in 3 blocks ==692459== suppressed: 835,588 bytes in 11,674 blocks ==692459== Reachable blocks (those to which a pointer was found) are not shown. ==692459== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==692459== ==692459== For lists of detected and suppressed errors, rerun with: -s ==692459== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)