==678349== Memcheck, a memory error detector ==678349== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==678349== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==678349== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsUpdateRules -malloc_debug -malloc_dump -memory_info ==678349== Parent PID: 676588 ==678349== ==678349== ==678349== FILE DESCRIPTORS: 9 open (3 std) at exit. ==678349== Open file descriptor 12: ==678349== at 0xE7A626D: pipe (pipe.c:29) ==678349== by 0x18A1F07D: ??? ==678349== by 0x12F7D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==678349== by 0xE0AE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==678349== by 0xE047D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==678349== by 0xCD3ED38: PetscInitialize (pinit.c:924) ==678349== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==678349== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==678349== by 0x133C55: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==678349== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==678349== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==678349== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==678349== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==678349== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==678349== ==678349== Open file descriptor 8: /dev/shm/open_mpi.0000 ==678349== at 0xE7AAC0C: __open_nocancel (open64_nocancel.c:39) ==678349== by 0xE72EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==678349== by 0xCBDE822: ??? ==678349== by 0xCBDE96F: ??? ==678349== by 0x130226DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==678349== by 0x13022938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==678349== by 0x12FD8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==678349== by 0x12F7D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==678349== by 0xE0AE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==678349== by 0xE047D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==678349== by 0xCD3ED38: PetscInitialize (pinit.c:924) ==678349== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==678349== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==678349== by 0x133C55: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==678349== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==678349== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==678349== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==678349== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==678349== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==678349== ==678349== Open file descriptor 116: ==678349== ==678349== ==678349== Open file descriptor 112: ==678349== ==678349== ==678349== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsUpdateRules_valgrind.txt ==678349== ==678349== ==678349== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==678349== ==678349== ==678349== ==678349== HEAP SUMMARY: ==678349== in use at exit: 835,628 bytes in 11,677 blocks ==678349== total heap usage: 75,341 allocs, 63,664 frees, 1,541,672,792 bytes allocated ==678349== ==678349== LEAK SUMMARY: ==678349== definitely lost: 0 bytes in 0 blocks ==678349== indirectly lost: 0 bytes in 0 blocks ==678349== possibly lost: 0 bytes in 0 blocks ==678349== still reachable: 56 bytes in 3 blocks ==678349== suppressed: 835,572 bytes in 11,674 blocks ==678349== Reachable blocks (those to which a pointer was found) are not shown. ==678349== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==678349== ==678349== For lists of detected and suppressed errors, rerun with: -s ==678349== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 46 from 46)