==692149== Memcheck, a memory error detector ==692149== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==692149== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==692149== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningPottsBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==692149== Parent PID: 676588 ==692149== ==692149== ==692149== FILE DESCRIPTORS: 9 open (3 std) at exit. ==692149== Open file descriptor 12: ==692149== at 0xD2AD26D: pipe (pipe.c:29) ==692149== by 0x18A1E07D: ??? ==692149== by 0x1402F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==692149== by 0x10816418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692149== by 0x107AFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692149== by 0xF4A6D38: PetscInitialize (pinit.c:924) ==692149== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==692149== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==692149== by 0x124714: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==692149== by 0x11FC2D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==692149== by 0x12224E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==692149== by 0x1220EE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==692149== by 0x122785: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==692149== by 0x11E055: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==692149== ==692149== Open file descriptor 8: /dev/shm/open_mpi.0000 ==692149== at 0xD2B1C0C: __open_nocancel (open64_nocancel.c:39) ==692149== by 0xD235BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==692149== by 0xCBDE822: ??? ==692149== by 0xCBDE96F: ??? ==692149== by 0x140D46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692149== by 0x140D4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692149== by 0x1408A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692149== by 0x1402F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==692149== by 0x10816418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692149== by 0x107AFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692149== by 0xF4A6D38: PetscInitialize (pinit.c:924) ==692149== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==692149== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==692149== by 0x124714: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==692149== by 0x11FC2D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==692149== by 0x12224E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==692149== by 0x1220EE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==692149== by 0x122785: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==692149== by 0x11E055: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==692149== ==692149== Open file descriptor 116: ==692149== ==692149== ==692149== Open file descriptor 112: ==692149== ==692149== ==692149== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningPottsBasedSimulationsTutorial_valgrind.txt ==692149== ==692149== ==692149== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==692149== ==692149== ==692149== ==692149== HEAP SUMMARY: ==692149== in use at exit: 835,562 bytes in 11,673 blocks ==692149== total heap usage: 40,694,717 allocs, 40,683,044 frees, 4,032,185,924 bytes allocated ==692149== ==692149== LEAK SUMMARY: ==692149== definitely lost: 0 bytes in 0 blocks ==692149== indirectly lost: 0 bytes in 0 blocks ==692149== possibly lost: 0 bytes in 0 blocks ==692149== still reachable: 56 bytes in 3 blocks ==692149== suppressed: 835,506 bytes in 11,670 blocks ==692149== Reachable blocks (those to which a pointer was found) are not shown. ==692149== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==692149== ==692149== For lists of detected and suppressed errors, rerun with: -s ==692149== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)