==692211== Memcheck, a memory error detector ==692211== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==692211== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==692211== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningTumourSpheroidSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==692211== Parent PID: 676588 ==692211== ==692211== ==692211== FILE DESCRIPTORS: 9 open (3 std) at exit. ==692211== Open file descriptor 12: ==692211== at 0xEF1326D: pipe (pipe.c:29) ==692211== by 0x18A1E07D: ??? ==692211== by 0x1402F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==692211== by 0x10816418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692211== by 0x107AFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692211== by 0xF4A4D38: PetscInitialize (pinit.c:924) ==692211== by 0xE80C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==692211== by 0xE80C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==692211== by 0x11CA56: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==692211== by 0x118313: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==692211== by 0x11A5FE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==692211== by 0x11A4F9: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==692211== by 0x11AB0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==692211== by 0x116B15: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==692211== ==692211== Open file descriptor 8: /dev/shm/open_mpi.0000 ==692211== at 0xEF17C0C: __open_nocancel (open64_nocancel.c:39) ==692211== by 0xEE9BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==692211== by 0xE846822: ??? ==692211== by 0xE84696F: ??? ==692211== by 0x140D46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692211== by 0x140D4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692211== by 0x1408A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==692211== by 0x1402F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==692211== by 0x10816418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692211== by 0x107AFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==692211== by 0xF4A4D38: PetscInitialize (pinit.c:924) ==692211== by 0xE80C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==692211== by 0xE80C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==692211== by 0x11CA56: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==692211== by 0x118313: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==692211== by 0x11A5FE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==692211== by 0x11A4F9: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==692211== by 0x11AB0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==692211== by 0x116B15: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==692211== ==692211== Open file descriptor 116: ==692211== ==692211== ==692211== Open file descriptor 112: ==692211== ==692211== ==692211== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningTumourSpheroidSimulationsTutorial_valgrind.txt ==692211== ==692211== ==692211== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==692211== ==692211== ==692211== ==692211== HEAP SUMMARY: ==692211== in use at exit: 835,562 bytes in 11,673 blocks ==692211== total heap usage: 2,092,019 allocs, 2,080,346 frees, 1,876,570,840 bytes allocated ==692211== ==692211== LEAK SUMMARY: ==692211== definitely lost: 0 bytes in 0 blocks ==692211== indirectly lost: 0 bytes in 0 blocks ==692211== possibly lost: 0 bytes in 0 blocks ==692211== still reachable: 56 bytes in 3 blocks ==692211== suppressed: 835,506 bytes in 11,670 blocks ==692211== Reachable blocks (those to which a pointer was found) are not shown. ==692211== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==692211== ==692211== For lists of detected and suppressed errors, rerun with: -s ==692211== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)