==814059== Memcheck, a memory error detector ==814059== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==814059== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==814059== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==814059== Parent PID: 812548 ==814059== ==814059== ==814059== FILE DESCRIPTORS: 9 open (3 std) at exit. ==814059== Open file descriptor 12: ==814059== at 0xE86426D: pipe (pipe.c:29) ==814059== by 0x18AE307D: ??? ==814059== by 0x140804CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==814059== by 0x104C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==814059== by 0x1045AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==814059== by 0xF14FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==814059== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==814059== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==814059== by 0x1654C8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==814059== by 0x15DB89: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==814059== by 0x160CF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==814059== by 0x160B94: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==814059== by 0x16122B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==814059== by 0x15BFA5: main (TestCaBasedCellPopulation.cpp:19) ==814059== ==814059== Open file descriptor 8: /dev/shm/open_mpi.0000 ==814059== at 0xE868C0C: __open_nocancel (open64_nocancel.c:39) ==814059== by 0xE7ECBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==814059== by 0xE49F822: ??? ==814059== by 0xE49F96F: ??? ==814059== by 0x141256DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==814059== by 0x14125938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==814059== by 0x140DB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==814059== by 0x140802DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==814059== by 0x104C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==814059== by 0x1045AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==814059== by 0xF14FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==814059== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==814059== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==814059== by 0x1654C8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==814059== by 0x15DB89: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==814059== by 0x160CF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==814059== by 0x160B94: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==814059== by 0x16122B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==814059== by 0x15BFA5: main (TestCaBasedCellPopulation.cpp:19) ==814059== ==814059== Open file descriptor 115: ==814059== ==814059== ==814059== Open file descriptor 112: ==814059== ==814059== ==814059== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaBasedCellPopulation_valgrind.txt ==814059== ==814059== ==814059== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==814059== ==814059== ==814059== ==814059== HEAP SUMMARY: ==814059== in use at exit: 858,019 bytes in 12,113 blocks ==814059== total heap usage: 83,505 allocs, 71,392 frees, 1,551,762,169 bytes allocated ==814059== ==814059== LEAK SUMMARY: ==814059== definitely lost: 0 bytes in 0 blocks ==814059== indirectly lost: 0 bytes in 0 blocks ==814059== possibly lost: 0 bytes in 0 blocks ==814059== still reachable: 56 bytes in 3 blocks ==814059== suppressed: 857,963 bytes in 12,110 blocks ==814059== Reachable blocks (those to which a pointer was found) are not shown. ==814059== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==814059== ==814059== For lists of detected and suppressed errors, rerun with: -s ==814059== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)