==821377== Memcheck, a memory error detector ==821377== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==821377== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==821377== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOdeBasedCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==821377== Parent PID: 812548 ==821377== ==821377== ==821377== FILE DESCRIPTORS: 9 open (3 std) at exit. ==821377== Open file descriptor 12: ==821377== at 0xFF5426D: pipe (pipe.c:29) ==821377== by 0x1A7A307D: ??? ==821377== by 0x145384CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==821377== by 0xFBA1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==821377== by 0xFB3AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==821377== by 0xE831D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==821377== by 0xE6A4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==821377== by 0xE6A41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==821377== by 0x1925C5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==821377== by 0x18A5CB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==821377== by 0x18DB64: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==821377== by 0x18DA04: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==821377== by 0x18E09B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==821377== by 0x186EF5: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==821377== ==821377== Open file descriptor 8: /dev/shm/open_mpi.0000 ==821377== at 0xFF58C0C: __open_nocancel (open64_nocancel.c:39) ==821377== by 0xFEDCBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==821377== by 0xE6D8822: ??? ==821377== by 0xE6D896F: ??? ==821377== by 0x145DD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==821377== by 0x145DD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==821377== by 0x14593922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==821377== by 0x145382DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==821377== by 0xFBA1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==821377== by 0xFB3AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==821377== by 0xE831D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==821377== by 0xE6A4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==821377== by 0xE6A41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==821377== by 0x1925C5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==821377== by 0x18A5CB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==821377== by 0x18DB64: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==821377== by 0x18DA04: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==821377== by 0x18E09B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==821377== by 0x186EF5: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==821377== ==821377== Open file descriptor 115: ==821377== ==821377== ==821377== Open file descriptor 112: ==821377== ==821377== ==821377== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModelsForCrypt_valgrind.txt ==821377== ==821377== ==821377== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==821377== ==821377== ==821377== ==821377== HEAP SUMMARY: ==821377== in use at exit: 858,099 bytes in 12,114 blocks ==821377== total heap usage: 870,118 allocs, 858,004 frees, 1,665,332,515 bytes allocated ==821377== ==821377== LEAK SUMMARY: ==821377== definitely lost: 0 bytes in 0 blocks ==821377== indirectly lost: 0 bytes in 0 blocks ==821377== possibly lost: 0 bytes in 0 blocks ==821377== still reachable: 120 bytes in 4 blocks ==821377== suppressed: 857,979 bytes in 12,110 blocks ==821377== Reachable blocks (those to which a pointer was found) are not shown. ==821377== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==821377== ==821377== For lists of detected and suppressed errors, rerun with: -s ==821377== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)