==821722== Memcheck, a memory error detector ==821722== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==821722== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==821722== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningVertexBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==821722== Parent PID: 812548 ==821722== ==821722== ==821722== FILE DESCRIPTORS: 9 open (3 std) at exit. ==821722== Open file descriptor 12: ==821722== at 0x1159826D: pipe (pipe.c:29) ==821722== by 0x1A7A207D: ??? ==821722== by 0x158F34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==821722== by 0x111E5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==821722== by 0x1117ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==821722== by 0xFE52D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==821722== by 0xFD2A153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==821722== by 0xFD2A1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==821722== by 0x11FCFF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==821722== by 0x11B5D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==821722== by 0x11D80A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==821722== by 0x11D706: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==821722== by 0x11DD19: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==821722== by 0x119DD5: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==821722== ==821722== Open file descriptor 8: /dev/shm/open_mpi.0000 ==821722== at 0x1159CC0C: __open_nocancel (open64_nocancel.c:39) ==821722== by 0x11520BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==821722== by 0x110DC822: ??? ==821722== by 0x110DC96F: ??? ==821722== by 0x159986DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==821722== by 0x15998938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==821722== by 0x1594E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==821722== by 0x158F32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==821722== by 0x111E5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==821722== by 0x1117ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==821722== by 0xFE52D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==821722== by 0xFD2A153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==821722== by 0xFD2A1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==821722== by 0x11FCFF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==821722== by 0x11B5D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==821722== by 0x11D80A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==821722== by 0x11D706: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==821722== by 0x11DD19: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==821722== by 0x119DD5: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==821722== ==821722== Open file descriptor 115: ==821722== ==821722== ==821722== Open file descriptor 112: ==821722== ==821722== ==821722== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedCryptSimulationsTutorial_valgrind.txt ==821722== ==821722== ==821722== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==821722== ==821722== ==821722== ==821722== HEAP SUMMARY: ==821722== in use at exit: 858,115 bytes in 12,114 blocks ==821722== total heap usage: 1,401,309 allocs, 1,389,195 frees, 1,653,092,397 bytes allocated ==821722== ==821722== LEAK SUMMARY: ==821722== definitely lost: 0 bytes in 0 blocks ==821722== indirectly lost: 0 bytes in 0 blocks ==821722== possibly lost: 0 bytes in 0 blocks ==821722== still reachable: 136 bytes in 4 blocks ==821722== suppressed: 857,979 bytes in 12,110 blocks ==821722== Reachable blocks (those to which a pointer was found) are not shown. ==821722== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==821722== ==821722== For lists of detected and suppressed errors, rerun with: -s ==821722== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)