==789363== Memcheck, a memory error detector ==789363== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==789363== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==789363== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==789363== Parent PID: 787814 ==789363== ==789363== ==789363== FILE DESCRIPTORS: 9 open (3 std) at exit. ==789363== Open file descriptor 12: ==789363== at 0xD2EF26D: pipe (pipe.c:29) ==789363== by 0x18A1E07D: ??? ==789363== by 0x1402F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==789363== by 0x10816418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==789363== by 0x107AFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==789363== by 0xF4A6D38: PetscInitialize (pinit.c:924) ==789363== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==789363== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==789363== by 0x132B46: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==789363== by 0x12BE43: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==789363== by 0x12E998: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==789363== by 0x12E893: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==789363== by 0x12EEA7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==789363== by 0x12A645: main (TestCaUpdateRules.cpp:18) ==789363== ==789363== Open file descriptor 8: /dev/shm/open_mpi.0000 ==789363== at 0xD2F3C0C: __open_nocancel (open64_nocancel.c:39) ==789363== by 0xD277BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==789363== by 0xCBDE822: ??? ==789363== by 0xCBDE96F: ??? ==789363== by 0x140D46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==789363== by 0x140D4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==789363== by 0x1408A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==789363== by 0x1402F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==789363== by 0x10816418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==789363== by 0x107AFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==789363== by 0xF4A6D38: PetscInitialize (pinit.c:924) ==789363== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==789363== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==789363== by 0x132B46: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==789363== by 0x12BE43: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==789363== by 0x12E998: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==789363== by 0x12E893: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==789363== by 0x12EEA7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==789363== by 0x12A645: main (TestCaUpdateRules.cpp:18) ==789363== ==789363== Open file descriptor 116: ==789363== ==789363== ==789363== Open file descriptor 112: ==789363== ==789363== ==789363== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==789363== ==789363== ==789363== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==789363== ==789363== ==789363== ==789363== HEAP SUMMARY: ==789363== in use at exit: 835,628 bytes in 11,677 blocks ==789363== total heap usage: 63,567 allocs, 51,890 frees, 1,540,879,549 bytes allocated ==789363== ==789363== LEAK SUMMARY: ==789363== definitely lost: 0 bytes in 0 blocks ==789363== indirectly lost: 0 bytes in 0 blocks ==789363== possibly lost: 0 bytes in 0 blocks ==789363== still reachable: 56 bytes in 3 blocks ==789363== suppressed: 835,572 bytes in 11,674 blocks ==789363== Reachable blocks (those to which a pointer was found) are not shown. ==789363== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==789363== ==789363== For lists of detected and suppressed errors, rerun with: -s ==789363== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)