==788957== Memcheck, a memory error detector ==788957== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==788957== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==788957== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCell -malloc_debug -malloc_dump -memory_info ==788957== Parent PID: 787814 ==788957== ==788957== ==788957== FILE DESCRIPTORS: 9 open (3 std) at exit. ==788957== Open file descriptor 12: ==788957== at 0xE41D26D: pipe (pipe.c:29) ==788957== by 0x18A1E07D: ??? ==788957== by 0x12F7D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==788957== by 0xE06C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==788957== by 0xE005D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==788957== by 0xCCCED38: PetscInitialize (pinit.c:924) ==788957== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==788957== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==788957== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==788957== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==788957== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==788957== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==788957== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==788957== by 0x1222F5: main (TestCell.cpp:19) ==788957== ==788957== Open file descriptor 8: /dev/shm/open_mpi.0000 ==788957== at 0xE421C0C: __open_nocancel (open64_nocancel.c:39) ==788957== by 0xE3A5BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==788957== by 0xDF5E822: ??? ==788957== by 0xDF5E96F: ??? ==788957== by 0x130226DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==788957== by 0x13022938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==788957== by 0x12FD8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==788957== by 0x12F7D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==788957== by 0xE06C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==788957== by 0xE005D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==788957== by 0xCCCED38: PetscInitialize (pinit.c:924) ==788957== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==788957== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==788957== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==788957== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==788957== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==788957== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==788957== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==788957== by 0x1222F5: main (TestCell.cpp:19) ==788957== ==788957== Open file descriptor 116: ==788957== ==788957== ==788957== Open file descriptor 112: ==788957== ==788957== ==788957== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCell_valgrind.txt ==788957== ==788957== ==788957== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==788957== ==788957== ==788957== ==788957== HEAP SUMMARY: ==788957== in use at exit: 835,690 bytes in 11,674 blocks ==788957== total heap usage: 5,191,350 allocs, 5,179,676 frees, 2,020,885,721 bytes allocated ==788957== ==788957== LEAK SUMMARY: ==788957== definitely lost: 0 bytes in 0 blocks ==788957== indirectly lost: 0 bytes in 0 blocks ==788957== possibly lost: 0 bytes in 0 blocks ==788957== still reachable: 184 bytes in 4 blocks ==788957== suppressed: 835,506 bytes in 11,670 blocks ==788957== Reachable blocks (those to which a pointer was found) are not shown. ==788957== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==788957== ==788957== For lists of detected and suppressed errors, rerun with: -s ==788957== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)