==806757== Memcheck, a memory error detector ==806757== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==806757== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==806757== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCheckpointing -malloc_debug -malloc_dump -memory_info ==806757== Parent PID: 787814 ==806757== ==806757== ==806757== FILE DESCRIPTORS: 9 open (3 std) at exit. ==806757== Open file descriptor 12: ==806757== at 0xA43E26D: pipe (pipe.c:29) ==806757== by 0x13F9407D: ??? ==806757== by 0xF7B14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==806757== by 0xBB36418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==806757== by 0xBACFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==806757== by 0xA7C6D38: PetscInitialize (pinit.c:924) ==806757== by 0x9D1B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==806757== by 0x9D1B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==806757== by 0x1239FA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==806757== by 0x11E4F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==806757== by 0x120D74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==806757== by 0x120C6F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==806757== by 0x121283: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==806757== by 0x11CCF5: main (TestCheckpointing.cpp:18) ==806757== ==806757== Open file descriptor 8: /dev/shm/open_mpi.0000 ==806757== at 0xA442C0C: __open_nocancel (open64_nocancel.c:39) ==806757== by 0xA3C6BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==806757== by 0x9D55822: ??? ==806757== by 0x9D5596F: ??? ==806757== by 0xF8566DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==806757== by 0xF856938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==806757== by 0xF80C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==806757== by 0xF7B12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==806757== by 0xBB36418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==806757== by 0xBACFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==806757== by 0xA7C6D38: PetscInitialize (pinit.c:924) ==806757== by 0x9D1B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==806757== by 0x9D1B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==806757== by 0x1239FA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==806757== by 0x11E4F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==806757== by 0x120D74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==806757== by 0x120C6F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==806757== by 0x121283: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==806757== by 0x11CCF5: main (TestCheckpointing.cpp:18) ==806757== ==806757== Open file descriptor 116: ==806757== ==806757== ==806757== Open file descriptor 112: ==806757== ==806757== ==806757== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCheckpointing_valgrind.txt ==806757== ==806757== ==806757== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==806757== ==806757== ==806757== ==806757== HEAP SUMMARY: ==806757== in use at exit: 836,026 bytes in 11,682 blocks ==806757== total heap usage: 843,390 allocs, 831,708 frees, 1,645,480,873 bytes allocated ==806757== ==806757== LEAK SUMMARY: ==806757== definitely lost: 0 bytes in 0 blocks ==806757== indirectly lost: 0 bytes in 0 blocks ==806757== possibly lost: 0 bytes in 0 blocks ==806757== still reachable: 24 bytes in 2 blocks ==806757== suppressed: 836,002 bytes in 11,680 blocks ==806757== Reachable blocks (those to which a pointer was found) are not shown. ==806757== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==806757== ==806757== For lists of detected and suppressed errors, rerun with: -s ==806757== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 60 from 34)