==787817== Memcheck, a memory error detector ==787817== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==787817== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==787817== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestCitations -malloc_debug -malloc_dump -memory_info ==787817== Parent PID: 787814 ==787817== ==787817== ==787817== FILE DESCRIPTORS: 9 open (3 std) at exit. ==787817== Open file descriptor 12: ==787817== at 0x4CBC26D: pipe (pipe.c:29) ==787817== by 0xAEA307D: ??? ==787817== by 0x89C54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==787817== by 0x6278418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==787817== by 0x6211D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==787817== by 0x4F08D38: PetscInitialize (pinit.c:924) ==787817== by 0x48FA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==787817== by 0x48FA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==787817== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==787817== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==787817== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==787817== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==787817== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==787817== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==787817== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==787817== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==787817== by 0x110C15: main (TestCitations.cpp:18) ==787817== ==787817== Open file descriptor 8: /dev/shm/open_mpi.0000 ==787817== at 0x4CC0C0C: __open_nocancel (open64_nocancel.c:39) ==787817== by 0x4C44BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==787817== by 0x4934822: ??? ==787817== by 0x493496F: ??? ==787817== by 0x8A6A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==787817== by 0x8A6A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==787817== by 0x8A20922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==787817== by 0x89C52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==787817== by 0x6278418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==787817== by 0x6211D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==787817== by 0x4F08D38: PetscInitialize (pinit.c:924) ==787817== by 0x48FA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==787817== by 0x48FA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==787817== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==787817== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==787817== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==787817== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==787817== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==787817== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==787817== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==787817== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==787817== by 0x110C15: main (TestCitations.cpp:18) ==787817== ==787817== Open file descriptor 116: ==787817== ==787817== ==787817== Open file descriptor 112: ==787817== ==787817== ==787817== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCitations_valgrind.txt ==787817== ==787817== ==787817== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==787817== ==787817== ==787817== ==787817== HEAP SUMMARY: ==787817== in use at exit: 835,132 bytes in 11,676 blocks ==787817== total heap usage: 53,580 allocs, 41,904 frees, 1,540,067,708 bytes allocated ==787817== ==787817== LEAK SUMMARY: ==787817== definitely lost: 0 bytes in 0 blocks ==787817== indirectly lost: 0 bytes in 0 blocks ==787817== possibly lost: 0 bytes in 0 blocks ==787817== still reachable: 24 bytes in 2 blocks ==787817== suppressed: 835,108 bytes in 11,674 blocks ==787817== Reachable blocks (those to which a pointer was found) are not shown. ==787817== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==787817== ==787817== For lists of detected and suppressed errors, rerun with: -s ==787817== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)