==789500== Memcheck, a memory error detector ==789500== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==789500== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==789500== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==789500== Parent PID: 787814 ==789500== ==789500== ==789500== FILE DESCRIPTORS: 9 open (3 std) at exit. ==789500== Open file descriptor 12: ==789500== at 0xEC4926D: pipe (pipe.c:29) ==789500== by 0x18A1E07D: ??? ==789500== by 0x1402F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==789500== by 0x10816418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==789500== by 0x107AFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==789500== by 0xF4A4D38: PetscInitialize (pinit.c:924) ==789500== by 0xE4FE153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==789500== by 0xE4FE1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==789500== by 0x2E2582: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==789500== by 0x2D9079: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==789500== by 0x2DD8D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==789500== by 0x2DD776: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==789500== by 0x2DDE0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==789500== by 0x2D7495: main (TestNodeBasedCellPopulation.cpp:19) ==789500== ==789500== Open file descriptor 8: /dev/shm/open_mpi.0000 ==789500== at 0xEC4DC0C: __open_nocancel (open64_nocancel.c:39) ==789500== by 0xEBD1BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==789500== by 0xE538822: ??? ==789500== by 0xE53896F: ??? ==789500== by 0x140D46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==789500== by 0x140D4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==789500== by 0x1408A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==789500== by 0x1402F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==789500== by 0x10816418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==789500== by 0x107AFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==789500== by 0xF4A4D38: PetscInitialize (pinit.c:924) ==789500== by 0xE4FE153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==789500== by 0xE4FE1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==789500== by 0x2E2582: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==789500== by 0x2D9079: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==789500== by 0x2DD8D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==789500== by 0x2DD776: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==789500== by 0x2DDE0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==789500== by 0x2D7495: main (TestNodeBasedCellPopulation.cpp:19) ==789500== ==789500== Open file descriptor 116: ==789500== ==789500== ==789500== Open file descriptor 112: ==789500== ==789500== ==789500== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==789500== ==789500== ==789500== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==789500== ==789500== ==789500== ==789500== HEAP SUMMARY: ==789500== in use at exit: 835,562 bytes in 11,673 blocks ==789500== total heap usage: 20,200,434 allocs, 20,188,761 frees, 2,764,649,508 bytes allocated ==789500== ==789500== LEAK SUMMARY: ==789500== definitely lost: 0 bytes in 0 blocks ==789500== indirectly lost: 0 bytes in 0 blocks ==789500== possibly lost: 0 bytes in 0 blocks ==789500== still reachable: 56 bytes in 3 blocks ==789500== suppressed: 835,506 bytes in 11,670 blocks ==789500== Reachable blocks (those to which a pointer was found) are not shown. ==789500== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==789500== ==789500== For lists of detected and suppressed errors, rerun with: -s ==789500== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)