==794089== Memcheck, a memory error detector ==794089== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==794089== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==794089== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==794089== Parent PID: 787814 ==794089== ==794089== ==794089== FILE DESCRIPTORS: 9 open (3 std) at exit. ==794089== Open file descriptor 12: ==794089== at 0xECA126D: pipe (pipe.c:29) ==794089== by 0x18A1E07D: ??? ==794089== by 0x1402F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==794089== by 0x108FD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==794089== by 0x10896D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==794089== by 0xF58DD38: PetscInitialize (pinit.c:924) ==794089== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==794089== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==794089== by 0x1D7654: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==794089== by 0x1CF139: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==794089== by 0x1D29B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==794089== by 0x1D2858: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==794089== by 0x1D2EEF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==794089== by 0x1CD555: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==794089== ==794089== Open file descriptor 8: /dev/shm/open_mpi.0000 ==794089== at 0xECA5C0C: __open_nocancel (open64_nocancel.c:39) ==794089== by 0xEC29BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==794089== by 0xE4A9822: ??? ==794089== by 0xE4A996F: ??? ==794089== by 0x140D46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==794089== by 0x140D4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==794089== by 0x1408A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==794089== by 0x1402F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==794089== by 0x108FD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==794089== by 0x10896D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==794089== by 0xF58DD38: PetscInitialize (pinit.c:924) ==794089== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==794089== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==794089== by 0x1D7654: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==794089== by 0x1CF139: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==794089== by 0x1D29B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==794089== by 0x1D2858: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==794089== by 0x1D2EEF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==794089== by 0x1CD555: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==794089== ==794089== Open file descriptor 116: ==794089== ==794089== ==794089== Open file descriptor 112: ==794089== ==794089== ==794089== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPottsBasedCellPopulation_valgrind.txt ==794089== ==794089== ==794089== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==794089== ==794089== ==794089== ==794089== HEAP SUMMARY: ==794089== in use at exit: 835,578 bytes in 11,674 blocks ==794089== total heap usage: 11,694,664 allocs, 11,682,990 frees, 2,411,063,313 bytes allocated ==794089== ==794089== LEAK SUMMARY: ==794089== definitely lost: 0 bytes in 0 blocks ==794089== indirectly lost: 0 bytes in 0 blocks ==794089== possibly lost: 0 bytes in 0 blocks ==794089== still reachable: 72 bytes in 4 blocks ==794089== suppressed: 835,506 bytes in 11,670 blocks ==794089== Reachable blocks (those to which a pointer was found) are not shown. ==794089== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==794089== ==794089== For lists of detected and suppressed errors, rerun with: -s ==794089== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)