==789547== Memcheck, a memory error detector ==789547== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==789547== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==789547== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPeriodicNodeBasedCellPopulationParallelMethods -malloc_debug -malloc_dump -memory_info ==789547== Parent PID: 787814 ==789547== ==789547== ==789547== FILE DESCRIPTORS: 9 open (3 std) at exit. ==789547== Open file descriptor 12: ==789547== at 0xEC5D26D: pipe (pipe.c:29) ==789547== by 0x18A1E07D: ??? ==789547== by 0x1402F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==789547== by 0x108FD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==789547== by 0x10896D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==789547== by 0xF58DD38: PetscInitialize (pinit.c:924) ==789547== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==789547== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==789547== by 0x12B4BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==789547== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==789547== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==789547== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==789547== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==789547== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==789547== ==789547== Open file descriptor 8: /dev/shm/open_mpi.0000 ==789547== at 0xEC61C0C: __open_nocancel (open64_nocancel.c:39) ==789547== by 0xEBE5BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==789547== by 0xE4A9822: ??? ==789547== by 0xE4A996F: ??? ==789547== by 0x140D46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==789547== by 0x140D4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==789547== by 0x1408A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==789547== by 0x1402F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==789547== by 0x108FD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==789547== by 0x10896D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==789547== by 0xF58DD38: PetscInitialize (pinit.c:924) ==789547== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==789547== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==789547== by 0x12B4BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==789547== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==789547== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==789547== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==789547== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==789547== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==789547== ==789547== Open file descriptor 116: ==789547== ==789547== ==789547== Open file descriptor 112: ==789547== ==789547== ==789547== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPeriodicNodeBasedCellPopulationParallelMethods_valgrind.txt ==789547== ==789547== ==789547== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==789547== ==789547== ==789547== ==789547== HEAP SUMMARY: ==789547== in use at exit: 835,628 bytes in 11,677 blocks ==789547== total heap usage: 60,895 allocs, 49,218 frees, 1,540,596,718 bytes allocated ==789547== ==789547== LEAK SUMMARY: ==789547== definitely lost: 0 bytes in 0 blocks ==789547== indirectly lost: 0 bytes in 0 blocks ==789547== possibly lost: 0 bytes in 0 blocks ==789547== still reachable: 56 bytes in 3 blocks ==789547== suppressed: 835,572 bytes in 11,674 blocks ==789547== Reachable blocks (those to which a pointer was found) are not shown. ==789547== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==789547== ==789547== For lists of detected and suppressed errors, rerun with: -s ==789547== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)