==803119== Memcheck, a memory error detector ==803119== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==803119== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==803119== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningDeltaNotchSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==803119== Parent PID: 787814 ==803119== ==803119== ==803119== FILE DESCRIPTORS: 9 open (3 std) at exit. ==803119== Open file descriptor 12: ==803119== at 0xEB7626D: pipe (pipe.c:29) ==803119== by 0x18A1E07D: ??? ==803119== by 0x1402F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==803119== by 0x10816418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==803119== by 0x107AFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==803119== by 0xF4A6D38: PetscInitialize (pinit.c:924) ==803119== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==803119== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==803119== by 0x122D30: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==803119== by 0x11E513: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==803119== by 0x120830: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==803119== by 0x12072B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==803119== by 0x120D3F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==803119== by 0x11CD15: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==803119== ==803119== Open file descriptor 8: /dev/shm/open_mpi.0000 ==803119== at 0xEB7AC0C: __open_nocancel (open64_nocancel.c:39) ==803119== by 0xEAFEBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==803119== by 0xE4A9822: ??? ==803119== by 0xE4A996F: ??? ==803119== by 0x140D46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==803119== by 0x140D4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==803119== by 0x1408A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==803119== by 0x1402F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==803119== by 0x10816418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==803119== by 0x107AFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==803119== by 0xF4A6D38: PetscInitialize (pinit.c:924) ==803119== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==803119== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==803119== by 0x122D30: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==803119== by 0x11E513: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==803119== by 0x120830: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==803119== by 0x12072B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==803119== by 0x120D3F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==803119== by 0x11CD15: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==803119== ==803119== Open file descriptor 116: ==803119== ==803119== ==803119== Open file descriptor 112: ==803119== ==803119== ==803119== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningDeltaNotchSimulationsTutorial_valgrind.txt ==803119== ==803119== ==803119== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==803119== ==803119== ==803119== ==803119== HEAP SUMMARY: ==803119== in use at exit: 835,562 bytes in 11,673 blocks ==803119== total heap usage: 5,186,325 allocs, 5,174,652 frees, 1,980,317,779 bytes allocated ==803119== ==803119== LEAK SUMMARY: ==803119== definitely lost: 0 bytes in 0 blocks ==803119== indirectly lost: 0 bytes in 0 blocks ==803119== possibly lost: 0 bytes in 0 blocks ==803119== still reachable: 56 bytes in 3 blocks ==803119== suppressed: 835,506 bytes in 11,670 blocks ==803119== Reachable blocks (those to which a pointer was found) are not shown. ==803119== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==803119== ==803119== For lists of detected and suppressed errors, rerun with: -s ==803119== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)