==864527== Memcheck, a memory error detector ==864527== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==864527== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==864527== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellCycleModelTutorial -malloc_debug -malloc_dump -memory_info ==864527== Parent PID: 849600 ==864527== ==864527== ==864527== FILE DESCRIPTORS: 9 open (3 std) at exit. ==864527== Open file descriptor 12: ==864527== at 0x10DE726D: pipe (pipe.c:29) ==864527== by 0x196AF07D: ??? ==864527== by 0x14C204CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==864527== by 0x10608418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==864527== by 0x105A1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==864527== by 0xF298D38: PetscInitialize (pinit.c:924) ==864527== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==864527== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==864527== by 0x2258F7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==864527== by 0x21F2AB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==864527== by 0x222B60: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==864527== by 0x222A01: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==864527== by 0x223097: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==864527== by 0x21BBD5: main (TestCreatingAndUsingANewCellCycleModelTutorial.cpp:19) ==864527== ==864527== Open file descriptor 8: /dev/shm/open_mpi.0000 ==864527== at 0x10DEBC0C: __open_nocancel (open64_nocancel.c:39) ==864527== by 0x10D6FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==864527== by 0xF13A822: ??? ==864527== by 0xF13A96F: ??? ==864527== by 0x14CC56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==864527== by 0x14CC5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==864527== by 0x14C7B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==864527== by 0x14C202DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==864527== by 0x10608418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==864527== by 0x105A1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==864527== by 0xF298D38: PetscInitialize (pinit.c:924) ==864527== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==864527== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==864527== by 0x2258F7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==864527== by 0x21F2AB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==864527== by 0x222B60: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==864527== by 0x222A01: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==864527== by 0x223097: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==864527== by 0x21BBD5: main (TestCreatingAndUsingANewCellCycleModelTutorial.cpp:19) ==864527== ==864527== Open file descriptor 116: ==864527== ==864527== ==864527== Open file descriptor 112: ==864527== ==864527== ==864527== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellCycleModelTutorial_valgrind.txt ==864527== ==864527== ==864527== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==864527== ==864527== ==864527== ==864527== HEAP SUMMARY: ==864527== in use at exit: 835,562 bytes in 11,673 blocks ==864527== total heap usage: 8,985,383 allocs, 8,973,710 frees, 2,386,357,032 bytes allocated ==864527== ==864527== LEAK SUMMARY: ==864527== definitely lost: 0 bytes in 0 blocks ==864527== indirectly lost: 0 bytes in 0 blocks ==864527== possibly lost: 0 bytes in 0 blocks ==864527== still reachable: 56 bytes in 3 blocks ==864527== suppressed: 835,506 bytes in 11,670 blocks ==864527== Reachable blocks (those to which a pointer was found) are not shown. ==864527== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==864527== ==864527== For lists of detected and suppressed errors, rerun with: -s ==864527== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)