==865573== Memcheck, a memory error detector ==865573== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==865573== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==865573== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulationBoundaryCondition -malloc_debug -malloc_dump -memory_info ==865573== Parent PID: 849600 ==865573== ==865573== ==865573== FILE DESCRIPTORS: 9 open (3 std) at exit. ==865573== Open file descriptor 12: ==865573== at 0x125C026D: pipe (pipe.c:29) ==865573== by 0x1B37007D: ??? ==865573== by 0x164F34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==865573== by 0x11EC8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==865573== by 0x11E61D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==865573== by 0x10B58D38: PetscInitialize (pinit.c:924) ==865573== by 0x109BF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==865573== by 0x109BF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==865573== by 0x14364B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==865573== by 0x13C4E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==865573== by 0x13F2A4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==865573== by 0x13F19F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==865573== by 0x13F7B3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==865573== by 0x13ACE5: main (TestCryptSimulationBoundaryCondition.cpp:18) ==865573== ==865573== Open file descriptor 8: /dev/shm/open_mpi.0000 ==865573== at 0x125C4C0C: __open_nocancel (open64_nocancel.c:39) ==865573== by 0x12548BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==865573== by 0x109FA822: ??? ==865573== by 0x109FA96F: ??? ==865573== by 0x165986DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==865573== by 0x16598938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==865573== by 0x1654E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==865573== by 0x164F32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==865573== by 0x11EC8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==865573== by 0x11E61D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==865573== by 0x10B58D38: PetscInitialize (pinit.c:924) ==865573== by 0x109BF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==865573== by 0x109BF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==865573== by 0x14364B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==865573== by 0x13C4E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==865573== by 0x13F2A4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==865573== by 0x13F19F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==865573== by 0x13F7B3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==865573== by 0x13ACE5: main (TestCryptSimulationBoundaryCondition.cpp:18) ==865573== ==865573== Open file descriptor 116: ==865573== ==865573== ==865573== Open file descriptor 112: ==865573== ==865573== ==865573== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulationBoundaryCondition_valgrind.txt ==865573== ==865573== ==865573== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==865573== ==865573== ==865573== ==865573== HEAP SUMMARY: ==865573== in use at exit: 835,724 bytes in 11,678 blocks ==865573== total heap usage: 78,372 allocs, 66,694 frees, 1,544,767,409 bytes allocated ==865573== ==865573== LEAK SUMMARY: ==865573== definitely lost: 0 bytes in 0 blocks ==865573== indirectly lost: 0 bytes in 0 blocks ==865573== possibly lost: 0 bytes in 0 blocks ==865573== still reachable: 136 bytes in 4 blocks ==865573== suppressed: 835,588 bytes in 11,674 blocks ==865573== Reachable blocks (those to which a pointer was found) are not shown. ==865573== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==865573== ==865573== For lists of detected and suppressed errors, rerun with: -s ==865573== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)