==851421== Memcheck, a memory error detector ==851421== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==851421== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==851421== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMutableVertexMeshOperationsWithPopulationSrn -malloc_debug -malloc_dump -memory_info ==851421== Parent PID: 849600 ==851421== ==851421== ==851421== FILE DESCRIPTORS: 9 open (3 std) at exit. ==851421== Open file descriptor 12: ==851421== at 0x10CBE26D: pipe (pipe.c:29) ==851421== by 0x196AF07D: ??? ==851421== by 0x14C204CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==851421== by 0x105C6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==851421== by 0x1055FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==851421== by 0xF228D38: PetscInitialize (pinit.c:924) ==851421== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==851421== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==851421== by 0x12FA43: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==851421== by 0x12AAD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==851421== by 0x12D2E4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==851421== by 0x12D1E0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==851421== by 0x12D7F3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==851421== by 0x1292D5: main (TestMutableVertexMeshOperationsWithPopulationSrn.cpp:18) ==851421== ==851421== Open file descriptor 8: /dev/shm/open_mpi.0000 ==851421== at 0x10CC2C0C: __open_nocancel (open64_nocancel.c:39) ==851421== by 0x10C46BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==851421== by 0x104B8822: ??? ==851421== by 0x104B896F: ??? ==851421== by 0x14CC56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==851421== by 0x14CC5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==851421== by 0x14C7B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==851421== by 0x14C202DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==851421== by 0x105C6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==851421== by 0x1055FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==851421== by 0xF228D38: PetscInitialize (pinit.c:924) ==851421== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==851421== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==851421== by 0x12FA43: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==851421== by 0x12AAD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==851421== by 0x12D2E4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==851421== by 0x12D1E0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==851421== by 0x12D7F3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==851421== by 0x1292D5: main (TestMutableVertexMeshOperationsWithPopulationSrn.cpp:18) ==851421== ==851421== Open file descriptor 116: ==851421== ==851421== ==851421== Open file descriptor 112: ==851421== ==851421== ==851421== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMutableVertexMeshOperationsWithPopulationSrn_valgrind.txt ==851421== ==851421== ==851421== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==851421== ==851421== ==851421== ==851421== HEAP SUMMARY: ==851421== in use at exit: 835,628 bytes in 11,677 blocks ==851421== total heap usage: 69,166 allocs, 57,489 frees, 1,541,054,236 bytes allocated ==851421== ==851421== LEAK SUMMARY: ==851421== definitely lost: 0 bytes in 0 blocks ==851421== indirectly lost: 0 bytes in 0 blocks ==851421== possibly lost: 0 bytes in 0 blocks ==851421== still reachable: 56 bytes in 3 blocks ==851421== suppressed: 835,572 bytes in 11,674 blocks ==851421== Reachable blocks (those to which a pointer was found) are not shown. ==851421== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==851421== ==851421== For lists of detected and suppressed errors, rerun with: -s ==851421== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)