==865438== Memcheck, a memory error detector ==865438== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==865438== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==865438== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOdeBasedCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==865438== Parent PID: 849600 ==865438== ==865438== ==865438== FILE DESCRIPTORS: 9 open (3 std) at exit. ==865438== Open file descriptor 12: ==865438== at 0x10BA826D: pipe (pipe.c:29) ==865438== by 0x1B37207D: ??? ==865438== by 0x155214CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==865438== by 0x104B0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==865438== by 0x10449D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==865438== by 0xF140D38: PetscInitialize (pinit.c:924) ==865438== by 0xEFA72DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==865438== by 0xEFA732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==865438== by 0x192669: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==865438== by 0x18A60B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==865438== by 0x18DC08: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==865438== by 0x18DAA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==865438== by 0x18E13F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==865438== by 0x186F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==865438== ==865438== Open file descriptor 8: /dev/shm/open_mpi.0000 ==865438== at 0x10BACC0C: __open_nocancel (open64_nocancel.c:39) ==865438== by 0x10B30BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==865438== by 0xEFE2822: ??? ==865438== by 0xEFE296F: ??? ==865438== by 0x155C66DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==865438== by 0x155C6938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==865438== by 0x1557C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==865438== by 0x155212DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==865438== by 0x104B0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==865438== by 0x10449D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==865438== by 0xF140D38: PetscInitialize (pinit.c:924) ==865438== by 0xEFA72DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==865438== by 0xEFA732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==865438== by 0x192669: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==865438== by 0x18A60B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==865438== by 0x18DC08: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==865438== by 0x18DAA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==865438== by 0x18E13F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==865438== by 0x186F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==865438== ==865438== Open file descriptor 116: ==865438== ==865438== ==865438== Open file descriptor 112: ==865438== ==865438== ==865438== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModelsForCrypt_valgrind.txt ==865438== ==865438== ==865438== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==865438== ==865438== ==865438== ==865438== HEAP SUMMARY: ==865438== in use at exit: 835,708 bytes in 11,678 blocks ==865438== total heap usage: 870,376 allocs, 858,698 frees, 1,662,656,938 bytes allocated ==865438== ==865438== LEAK SUMMARY: ==865438== definitely lost: 0 bytes in 0 blocks ==865438== indirectly lost: 0 bytes in 0 blocks ==865438== possibly lost: 0 bytes in 0 blocks ==865438== still reachable: 120 bytes in 4 blocks ==865438== suppressed: 835,588 bytes in 11,674 blocks ==865438== Reachable blocks (those to which a pointer was found) are not shown. ==865438== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==865438== ==865438== For lists of detected and suppressed errors, rerun with: -s ==865438== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)