==851975== Memcheck, a memory error detector ==851975== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==851975== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==851975== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==851975== Parent PID: 849600 ==851975== ==851975== ==851975== FILE DESCRIPTORS: 9 open (3 std) at exit. ==851975== Open file descriptor 12: ==851975== at 0xFCCF26D: pipe (pipe.c:29) ==851975== by 0x196AF07D: ??? ==851975== by 0x14CC94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==851975== by 0x1158E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==851975== by 0x11527D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==851975== by 0x1021ED38: PetscInitialize (pinit.c:924) ==851975== by 0xF49C2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==851975== by 0xF49C32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==851975== by 0x226536: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==851975== by 0x21FB71: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==851975== by 0x2236DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==851975== by 0x22357C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==851975== by 0x223C13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==851975== by 0x21DF55: main (TestOffLatticeSimulationWithPdes.cpp:19) ==851975== ==851975== Open file descriptor 8: /dev/shm/open_mpi.0000 ==851975== at 0xFCD3C0C: __open_nocancel (open64_nocancel.c:39) ==851975== by 0xFC57BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==851975== by 0xF4D7822: ??? ==851975== by 0xF4D796F: ??? ==851975== by 0x14D6E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==851975== by 0x14D6E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==851975== by 0x14D24922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==851975== by 0x14CC92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==851975== by 0x1158E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==851975== by 0x11527D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==851975== by 0x1021ED38: PetscInitialize (pinit.c:924) ==851975== by 0xF49C2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==851975== by 0xF49C32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==851975== by 0x226536: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==851975== by 0x21FB71: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==851975== by 0x2236DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==851975== by 0x22357C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==851975== by 0x223C13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==851975== by 0x21DF55: main (TestOffLatticeSimulationWithPdes.cpp:19) ==851975== ==851975== Open file descriptor 116: ==851975== ==851975== ==851975== Open file descriptor 112: ==851975== ==851975== ==851975== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==851975== ==851975== ==851975== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==851975== ==851975== ==851975== ==851975== HEAP SUMMARY: ==851975== in use at exit: 835,562 bytes in 11,673 blocks ==851975== total heap usage: 7,504,323 allocs, 7,492,650 frees, 2,846,106,749 bytes allocated ==851975== ==851975== LEAK SUMMARY: ==851975== definitely lost: 0 bytes in 0 blocks ==851975== indirectly lost: 0 bytes in 0 blocks ==851975== possibly lost: 0 bytes in 0 blocks ==851975== still reachable: 56 bytes in 3 blocks ==851975== suppressed: 835,506 bytes in 11,670 blocks ==851975== Reachable blocks (those to which a pointer was found) are not shown. ==851975== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==851975== ==851975== For lists of detected and suppressed errors, rerun with: -s ==851975== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)