==851705== Memcheck, a memory error detector ==851705== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==851705== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==851705== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==851705== Parent PID: 849600 ==851705== ==851705== ==851705== FILE DESCRIPTORS: 9 open (3 std) at exit. ==851705== Open file descriptor 12: ==851705== at 0xF93226D: pipe (pipe.c:29) ==851705== by 0x196AF07D: ??? ==851705== by 0x14CC04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==851705== by 0x1158E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==851705== by 0x11527D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==851705== by 0x1021ED38: PetscInitialize (pinit.c:924) ==851705== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==851705== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==851705== by 0x311532: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==851705== by 0x307AD9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==851705== by 0x30BEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==851705== by 0x30BD80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==851705== by 0x30C417: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==851705== by 0x305EF5: main (TestOffLatticeSimulation.cpp:19) ==851705== ==851705== Open file descriptor 8: /dev/shm/open_mpi.0000 ==851705== at 0xF936C0C: __open_nocancel (open64_nocancel.c:39) ==851705== by 0xF8BABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==851705== by 0xF13A822: ??? ==851705== by 0xF13A96F: ??? ==851705== by 0x14D656DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==851705== by 0x14D65938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==851705== by 0x14D1B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==851705== by 0x14CC02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==851705== by 0x1158E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==851705== by 0x11527D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==851705== by 0x1021ED38: PetscInitialize (pinit.c:924) ==851705== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==851705== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==851705== by 0x311532: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==851705== by 0x307AD9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==851705== by 0x30BEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==851705== by 0x30BD80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==851705== by 0x30C417: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==851705== by 0x305EF5: main (TestOffLatticeSimulation.cpp:19) ==851705== ==851705== Open file descriptor 116: ==851705== ==851705== ==851705== Open file descriptor 112: ==851705== ==851705== ==851705== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==851705== ==851705== ==851705== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==851705== ==851705== ==851705== ==851705== HEAP SUMMARY: ==851705== in use at exit: 835,562 bytes in 11,673 blocks ==851705== total heap usage: 12,871,642 allocs, 12,859,969 frees, 4,065,185,329 bytes allocated ==851705== ==851705== LEAK SUMMARY: ==851705== definitely lost: 0 bytes in 0 blocks ==851705== indirectly lost: 0 bytes in 0 blocks ==851705== possibly lost: 0 bytes in 0 blocks ==851705== still reachable: 56 bytes in 3 blocks ==851705== suppressed: 835,506 bytes in 11,670 blocks ==851705== Reachable blocks (those to which a pointer was found) are not shown. ==851705== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==851705== ==851705== For lists of detected and suppressed errors, rerun with: -s ==851705== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)