==852096== Memcheck, a memory error detector ==852096== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==852096== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==852096== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==852096== Parent PID: 849600 ==852096== ==852096== ==852096== FILE DESCRIPTORS: 9 open (3 std) at exit. ==852096== Open file descriptor 12: ==852096== at 0xFDAE26D: pipe (pipe.c:29) ==852096== by 0x196B007D: ??? ==852096== by 0x14DE54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==852096== by 0x11A0A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==852096== by 0x119A3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==852096== by 0x1069AD38: PetscInitialize (pinit.c:924) ==852096== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==852096== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==852096== by 0x1D4486: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==852096== by 0x1CDDB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==852096== by 0x1D1554: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==852096== by 0x1D13F4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==852096== by 0x1D1A8B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==852096== by 0x1CC1D5: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==852096== ==852096== Open file descriptor 8: /dev/shm/open_mpi.0000 ==852096== at 0xFDB2C0C: __open_nocancel (open64_nocancel.c:39) ==852096== by 0xFD36BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==852096== by 0xF13A822: ??? ==852096== by 0xF13A96F: ??? ==852096== by 0x14E8A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==852096== by 0x14E8A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==852096== by 0x14E40922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==852096== by 0x14DE52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==852096== by 0x11A0A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==852096== by 0x119A3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==852096== by 0x1069AD38: PetscInitialize (pinit.c:924) ==852096== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==852096== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==852096== by 0x1D4486: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==852096== by 0x1CDDB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==852096== by 0x1D1554: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==852096== by 0x1D13F4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==852096== by 0x1D1A8B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==852096== by 0x1CC1D5: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==852096== ==852096== Open file descriptor 116: ==852096== ==852096== ==852096== Open file descriptor 112: ==852096== ==852096== ==852096== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithCaBasedCellPopulation_valgrind.txt ==852096== ==852096== ==852096== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==852096== ==852096== ==852096== ==852096== HEAP SUMMARY: ==852096== in use at exit: 835,562 bytes in 11,673 blocks ==852096== total heap usage: 7,401,006 allocs, 7,389,333 frees, 8,325,655,842 bytes allocated ==852096== ==852096== LEAK SUMMARY: ==852096== definitely lost: 0 bytes in 0 blocks ==852096== indirectly lost: 0 bytes in 0 blocks ==852096== possibly lost: 0 bytes in 0 blocks ==852096== still reachable: 56 bytes in 3 blocks ==852096== suppressed: 835,506 bytes in 11,670 blocks ==852096== Reachable blocks (those to which a pointer was found) are not shown. ==852096== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==852096== ==852096== For lists of detected and suppressed errors, rerun with: -s ==852096== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)