==851457== Memcheck, a memory error detector ==851457== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==851457== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==851457== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPeriodicNodeBasedCellPopulationParallelMethods -malloc_debug -malloc_dump -memory_info ==851457== Parent PID: 849600 ==851457== ==851457== ==851457== FILE DESCRIPTORS: 9 open (3 std) at exit. ==851457== Open file descriptor 12: ==851457== at 0xF8EE26D: pipe (pipe.c:29) ==851457== by 0x196AF07D: ??? ==851457== by 0x14CC04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==851457== by 0x1158E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==851457== by 0x11527D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==851457== by 0x1021ED38: PetscInitialize (pinit.c:924) ==851457== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==851457== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==851457== by 0x12B4BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==851457== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==851457== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==851457== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==851457== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==851457== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==851457== ==851457== Open file descriptor 8: /dev/shm/open_mpi.0000 ==851457== at 0xF8F2C0C: __open_nocancel (open64_nocancel.c:39) ==851457== by 0xF876BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==851457== by 0xF13A822: ??? ==851457== by 0xF13A96F: ??? ==851457== by 0x14D656DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==851457== by 0x14D65938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==851457== by 0x14D1B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==851457== by 0x14CC02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==851457== by 0x1158E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==851457== by 0x11527D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==851457== by 0x1021ED38: PetscInitialize (pinit.c:924) ==851457== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==851457== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==851457== by 0x12B4BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==851457== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==851457== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==851457== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==851457== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==851457== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==851457== ==851457== Open file descriptor 116: ==851457== ==851457== ==851457== Open file descriptor 112: ==851457== ==851457== ==851457== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPeriodicNodeBasedCellPopulationParallelMethods_valgrind.txt ==851457== ==851457== ==851457== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==851457== ==851457== ==851457== ==851457== HEAP SUMMARY: ==851457== in use at exit: 835,628 bytes in 11,677 blocks ==851457== total heap usage: 61,436 allocs, 49,759 frees, 1,540,645,418 bytes allocated ==851457== ==851457== LEAK SUMMARY: ==851457== definitely lost: 0 bytes in 0 blocks ==851457== indirectly lost: 0 bytes in 0 blocks ==851457== possibly lost: 0 bytes in 0 blocks ==851457== still reachable: 56 bytes in 3 blocks ==851457== suppressed: 835,572 bytes in 11,674 blocks ==851457== Reachable blocks (those to which a pointer was found) are not shown. ==851457== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==851457== ==851457== For lists of detected and suppressed errors, rerun with: -s ==851457== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)