==865172== Memcheck, a memory error detector ==865172== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==865172== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==865172== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningDeltaNotchSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==865172== Parent PID: 849600 ==865172== ==865172== ==865172== FILE DESCRIPTORS: 9 open (3 std) at exit. ==865172== Open file descriptor 12: ==865172== at 0xF80726D: pipe (pipe.c:29) ==865172== by 0x196AF07D: ??? ==865172== by 0x14CC04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==865172== by 0x114A7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==865172== by 0x11440D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==865172== by 0x10137D38: PetscInitialize (pinit.c:924) ==865172== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==865172== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==865172== by 0x122D30: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==865172== by 0x11E513: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==865172== by 0x120830: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==865172== by 0x12072B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==865172== by 0x120D3F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==865172== by 0x11CD15: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==865172== ==865172== Open file descriptor 8: /dev/shm/open_mpi.0000 ==865172== at 0xF80BC0C: __open_nocancel (open64_nocancel.c:39) ==865172== by 0xF78FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==865172== by 0xF13A822: ??? ==865172== by 0xF13A96F: ??? ==865172== by 0x14D656DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==865172== by 0x14D65938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==865172== by 0x14D1B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==865172== by 0x14CC02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==865172== by 0x114A7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==865172== by 0x11440D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==865172== by 0x10137D38: PetscInitialize (pinit.c:924) ==865172== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==865172== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==865172== by 0x122D30: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==865172== by 0x11E513: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==865172== by 0x120830: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==865172== by 0x12072B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==865172== by 0x120D3F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==865172== by 0x11CD15: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==865172== ==865172== Open file descriptor 116: ==865172== ==865172== ==865172== Open file descriptor 112: ==865172== ==865172== ==865172== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningDeltaNotchSimulationsTutorial_valgrind.txt ==865172== ==865172== ==865172== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==865172== ==865172== ==865172== ==865172== HEAP SUMMARY: ==865172== in use at exit: 835,562 bytes in 11,673 blocks ==865172== total heap usage: 5,186,862 allocs, 5,175,189 frees, 1,980,367,043 bytes allocated ==865172== ==865172== LEAK SUMMARY: ==865172== definitely lost: 0 bytes in 0 blocks ==865172== indirectly lost: 0 bytes in 0 blocks ==865172== possibly lost: 0 bytes in 0 blocks ==865172== still reachable: 56 bytes in 3 blocks ==865172== suppressed: 835,506 bytes in 11,670 blocks ==865172== Reachable blocks (those to which a pointer was found) are not shown. ==865172== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==865172== ==865172== For lists of detected and suppressed errors, rerun with: -s ==865172== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)