==865350== Memcheck, a memory error detector ==865350== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==865350== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==865350== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningVertexBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==865350== Parent PID: 849600 ==865350== ==865350== ==865350== FILE DESCRIPTORS: 9 open (3 std) at exit. ==865350== Open file descriptor 12: ==865350== at 0x10DA526D: pipe (pipe.c:29) ==865350== by 0x196AF07D: ??? ==865350== by 0x14C204CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==865350== by 0x105C6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==865350== by 0x1055FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==865350== by 0xF228D38: PetscInitialize (pinit.c:924) ==865350== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==865350== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==865350== by 0x1298A9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==865350== by 0x124A2D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==865350== by 0x1270AA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==865350== by 0x126F4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==865350== by 0x1275E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==865350== by 0x122E55: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==865350== ==865350== Open file descriptor 8: /dev/shm/open_mpi.0000 ==865350== at 0x10DA9C0C: __open_nocancel (open64_nocancel.c:39) ==865350== by 0x10D2DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==865350== by 0x104B8822: ??? ==865350== by 0x104B896F: ??? ==865350== by 0x14CC56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==865350== by 0x14CC5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==865350== by 0x14C7B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==865350== by 0x14C202DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==865350== by 0x105C6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==865350== by 0x1055FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==865350== by 0xF228D38: PetscInitialize (pinit.c:924) ==865350== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==865350== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==865350== by 0x1298A9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==865350== by 0x124A2D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==865350== by 0x1270AA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==865350== by 0x126F4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==865350== by 0x1275E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==865350== by 0x122E55: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==865350== ==865350== Open file descriptor 116: ==865350== ==865350== ==865350== Open file descriptor 112: ==865350== ==865350== ==865350== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedSimulationsTutorial_valgrind.txt ==865350== ==865350== ==865350== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==865350== ==865350== ==865350== ==865350== HEAP SUMMARY: ==865350== in use at exit: 835,562 bytes in 11,673 blocks ==865350== total heap usage: 1,407,731 allocs, 1,396,058 frees, 1,600,284,749 bytes allocated ==865350== ==865350== LEAK SUMMARY: ==865350== definitely lost: 0 bytes in 0 blocks ==865350== indirectly lost: 0 bytes in 0 blocks ==865350== possibly lost: 0 bytes in 0 blocks ==865350== still reachable: 56 bytes in 3 blocks ==865350== suppressed: 835,506 bytes in 11,670 blocks ==865350== Reachable blocks (those to which a pointer was found) are not shown. ==865350== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==865350== ==865350== For lists of detected and suppressed errors, rerun with: -s ==865350== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)