==890393== Memcheck, a memory error detector ==890393== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==890393== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==890393== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==890393== Parent PID: 888828 ==890393== ==890393== ==890393== FILE DESCRIPTORS: 9 open (3 std) at exit. ==890393== Open file descriptor 12: ==890393== at 0xD2EF26D: pipe (pipe.c:29) ==890393== by 0x18A1E07D: ??? ==890393== by 0x1402F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==890393== by 0x10816418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==890393== by 0x107AFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==890393== by 0xF4A6D38: PetscInitialize (pinit.c:924) ==890393== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==890393== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==890393== by 0x132B46: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==890393== by 0x12BE43: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==890393== by 0x12E998: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==890393== by 0x12E893: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==890393== by 0x12EEA7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==890393== by 0x12A645: main (TestCaUpdateRules.cpp:18) ==890393== ==890393== Open file descriptor 8: /dev/shm/open_mpi.0000 ==890393== at 0xD2F3C0C: __open_nocancel (open64_nocancel.c:39) ==890393== by 0xD277BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==890393== by 0xCBDE822: ??? ==890393== by 0xCBDE96F: ??? ==890393== by 0x140D46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==890393== by 0x140D4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==890393== by 0x1408A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==890393== by 0x1402F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==890393== by 0x10816418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==890393== by 0x107AFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==890393== by 0xF4A6D38: PetscInitialize (pinit.c:924) ==890393== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==890393== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==890393== by 0x132B46: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==890393== by 0x12BE43: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==890393== by 0x12E998: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==890393== by 0x12E893: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==890393== by 0x12EEA7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==890393== by 0x12A645: main (TestCaUpdateRules.cpp:18) ==890393== ==890393== Open file descriptor 116: ==890393== ==890393== ==890393== Open file descriptor 112: ==890393== ==890393== ==890393== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==890393== ==890393== ==890393== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==890393== ==890393== ==890393== ==890393== HEAP SUMMARY: ==890393== in use at exit: 835,628 bytes in 11,677 blocks ==890393== total heap usage: 63,566 allocs, 51,889 frees, 1,540,879,800 bytes allocated ==890393== ==890393== LEAK SUMMARY: ==890393== definitely lost: 0 bytes in 0 blocks ==890393== indirectly lost: 0 bytes in 0 blocks ==890393== possibly lost: 0 bytes in 0 blocks ==890393== still reachable: 56 bytes in 3 blocks ==890393== suppressed: 835,572 bytes in 11,674 blocks ==890393== Reachable blocks (those to which a pointer was found) are not shown. ==890393== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==890393== ==890393== For lists of detected and suppressed errors, rerun with: -s ==890393== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)