==888831== Memcheck, a memory error detector ==888831== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==888831== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==888831== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestCitations -malloc_debug -malloc_dump -memory_info ==888831== Parent PID: 888828 ==888831== ==888831== ==888831== FILE DESCRIPTORS: 9 open (3 std) at exit. ==888831== Open file descriptor 12: ==888831== at 0x4CBC26D: pipe (pipe.c:29) ==888831== by 0xAEA307D: ??? ==888831== by 0x89C54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==888831== by 0x6278418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==888831== by 0x6211D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==888831== by 0x4F08D38: PetscInitialize (pinit.c:924) ==888831== by 0x48FA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==888831== by 0x48FA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==888831== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==888831== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==888831== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==888831== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==888831== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==888831== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==888831== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==888831== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==888831== by 0x110C15: main (TestCitations.cpp:18) ==888831== ==888831== Open file descriptor 8: /dev/shm/open_mpi.0000 ==888831== at 0x4CC0C0C: __open_nocancel (open64_nocancel.c:39) ==888831== by 0x4C44BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==888831== by 0x4934822: ??? ==888831== by 0x493496F: ??? ==888831== by 0x8A6A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==888831== by 0x8A6A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==888831== by 0x8A20922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==888831== by 0x89C52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==888831== by 0x6278418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==888831== by 0x6211D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==888831== by 0x4F08D38: PetscInitialize (pinit.c:924) ==888831== by 0x48FA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==888831== by 0x48FA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==888831== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==888831== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==888831== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==888831== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==888831== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==888831== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==888831== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==888831== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==888831== by 0x110C15: main (TestCitations.cpp:18) ==888831== ==888831== Open file descriptor 116: ==888831== ==888831== ==888831== Open file descriptor 112: ==888831== ==888831== ==888831== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCitations_valgrind.txt ==888831== ==888831== ==888831== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==888831== ==888831== ==888831== ==888831== HEAP SUMMARY: ==888831== in use at exit: 835,132 bytes in 11,676 blocks ==888831== total heap usage: 53,592 allocs, 41,916 frees, 1,540,068,036 bytes allocated ==888831== ==888831== LEAK SUMMARY: ==888831== definitely lost: 0 bytes in 0 blocks ==888831== indirectly lost: 0 bytes in 0 blocks ==888831== possibly lost: 0 bytes in 0 blocks ==888831== still reachable: 24 bytes in 2 blocks ==888831== suppressed: 835,108 bytes in 11,674 blocks ==888831== Reachable blocks (those to which a pointer was found) are not shown. ==888831== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==888831== ==888831== For lists of detected and suppressed errors, rerun with: -s ==888831== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)