==889061== Memcheck, a memory error detector ==889061== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==889061== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==889061== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/io/test/TestColumnDataReaderWriter -malloc_debug -malloc_dump -memory_info ==889061== Parent PID: 888828 ==889061== ==889061== ==889061== FILE DESCRIPTORS: 9 open (3 std) at exit. ==889061== Open file descriptor 12: ==889061== at 0x61E626D: pipe (pipe.c:29) ==889061== by 0xAF1607D: ??? ==889061== by 0x8A384CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==889061== by 0x5E35418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==889061== by 0x5DCED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==889061== by 0x4A95D38: PetscInitialize (pinit.c:924) ==889061== by 0x496D153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==889061== by 0x496D1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==889061== by 0x11A4DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==889061== by 0x1156CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==889061== by 0x118520: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==889061== by 0x1183C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==889061== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==889061== by 0x113AF5: main (TestColumnDataReaderWriter.cpp:19) ==889061== ==889061== Open file descriptor 8: /dev/shm/open_mpi.0000 ==889061== at 0x61EAC0C: __open_nocancel (open64_nocancel.c:39) ==889061== by 0x616EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==889061== by 0x5D25822: ??? ==889061== by 0x5D2596F: ??? ==889061== by 0x8ADF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==889061== by 0x8ADF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==889061== by 0x8A95922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==889061== by 0x8A382DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==889061== by 0x5E35418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==889061== by 0x5DCED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==889061== by 0x4A95D38: PetscInitialize (pinit.c:924) ==889061== by 0x496D153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==889061== by 0x496D1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==889061== by 0x11A4DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==889061== by 0x1156CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==889061== by 0x118520: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==889061== by 0x1183C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==889061== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==889061== by 0x113AF5: main (TestColumnDataReaderWriter.cpp:19) ==889061== ==889061== Open file descriptor 116: ==889061== ==889061== ==889061== Open file descriptor 112: ==889061== ==889061== ==889061== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestColumnDataReaderWriter_valgrind.txt ==889061== ==889061== ==889061== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==889061== ==889061== ==889061== ==889061== HEAP SUMMARY: ==889061== in use at exit: 835,148 bytes in 11,676 blocks ==889061== total heap usage: 70,295 allocs, 58,619 frees, 1,542,974,135 bytes allocated ==889061== ==889061== LEAK SUMMARY: ==889061== definitely lost: 0 bytes in 0 blocks ==889061== indirectly lost: 0 bytes in 0 blocks ==889061== possibly lost: 0 bytes in 0 blocks ==889061== still reachable: 24 bytes in 2 blocks ==889061== suppressed: 835,124 bytes in 11,674 blocks ==889061== Reachable blocks (those to which a pointer was found) are not shown. ==889061== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==889061== ==889061== For lists of detected and suppressed errors, rerun with: -s ==889061== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)