==890503== Memcheck, a memory error detector ==890503== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==890503== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==890503== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==890503== Parent PID: 888828 ==890503== ==890503== ==890503== FILE DESCRIPTORS: 9 open (3 std) at exit. ==890503== Open file descriptor 12: ==890503== at 0xECA126D: pipe (pipe.c:29) ==890503== by 0x18A1E07D: ??? ==890503== by 0x1402F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==890503== by 0x108FD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==890503== by 0x10896D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==890503== by 0xF58DD38: PetscInitialize (pinit.c:924) ==890503== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==890503== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==890503== by 0x2EFABE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==890503== by 0x2E6479: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==890503== by 0x2EAD7E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==890503== by 0x2EAC1E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==890503== by 0x2EB2B5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==890503== by 0x2E4895: main (TestMeshBasedCellPopulation.cpp:19) ==890503== ==890503== Open file descriptor 8: /dev/shm/open_mpi.0000 ==890503== at 0xECA5C0C: __open_nocancel (open64_nocancel.c:39) ==890503== by 0xEC29BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==890503== by 0xE4A9822: ??? ==890503== by 0xE4A996F: ??? ==890503== by 0x140D46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==890503== by 0x140D4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==890503== by 0x1408A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==890503== by 0x1402F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==890503== by 0x108FD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==890503== by 0x10896D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==890503== by 0xF58DD38: PetscInitialize (pinit.c:924) ==890503== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==890503== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==890503== by 0x2EFABE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==890503== by 0x2E6479: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==890503== by 0x2EAD7E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==890503== by 0x2EAC1E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==890503== by 0x2EB2B5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==890503== by 0x2E4895: main (TestMeshBasedCellPopulation.cpp:19) ==890503== ==890503== Open file descriptor 116: ==890503== ==890503== ==890503== Open file descriptor 112: ==890503== ==890503== ==890503== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulation_valgrind.txt ==890503== ==890503== ==890503== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==890503== ==890503== ==890503== ==890503== HEAP SUMMARY: ==890503== in use at exit: 835,628 bytes in 11,677 blocks ==890503== total heap usage: 153,072 allocs, 141,395 frees, 1,568,320,288 bytes allocated ==890503== ==890503== LEAK SUMMARY: ==890503== definitely lost: 0 bytes in 0 blocks ==890503== indirectly lost: 0 bytes in 0 blocks ==890503== possibly lost: 0 bytes in 0 blocks ==890503== still reachable: 56 bytes in 3 blocks ==890503== suppressed: 835,572 bytes in 11,674 blocks ==890503== Reachable blocks (those to which a pointer was found) are not shown. ==890503== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==890503== ==890503== For lists of detected and suppressed errors, rerun with: -s ==890503== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)