==890037== Memcheck, a memory error detector ==890037== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==890037== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==890037== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedCellCycleModels -malloc_debug -malloc_dump -memory_info ==890037== Parent PID: 888828 ==890037== ==890037== ==890037== FILE DESCRIPTORS: 9 open (3 std) at exit. ==890037== Open file descriptor 12: ==890037== at 0xE6A426D: pipe (pipe.c:29) ==890037== by 0x18A1E07D: ??? ==890037== by 0x12FCE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==890037== by 0xE2F1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==890037== by 0xE28AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==890037== by 0xCF81D38: PetscInitialize (pinit.c:924) ==890037== by 0xCDE9153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==890037== by 0xCDE91A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==890037== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==890037== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==890037== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==890037== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==890037== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==890037== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==890037== ==890037== Open file descriptor 8: /dev/shm/open_mpi.0000 ==890037== at 0xE6A8C0C: __open_nocancel (open64_nocancel.c:39) ==890037== by 0xE62CBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==890037== by 0xCE23822: ??? ==890037== by 0xCE2396F: ??? ==890037== by 0x130736DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==890037== by 0x13073938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==890037== by 0x13029922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==890037== by 0x12FCE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==890037== by 0xE2F1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==890037== by 0xE28AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==890037== by 0xCF81D38: PetscInitialize (pinit.c:924) ==890037== by 0xCDE9153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==890037== by 0xCDE91A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==890037== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==890037== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==890037== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==890037== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==890037== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==890037== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==890037== ==890037== Open file descriptor 116: ==890037== ==890037== ==890037== Open file descriptor 112: ==890037== ==890037== ==890037== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModels_valgrind.txt ==890037== ==890037== ==890037== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==890037== ==890037== ==890037== ==890037== HEAP SUMMARY: ==890037== in use at exit: 835,578 bytes in 11,674 blocks ==890037== total heap usage: 4,187,129 allocs, 4,175,455 frees, 1,971,771,985 bytes allocated ==890037== ==890037== LEAK SUMMARY: ==890037== definitely lost: 0 bytes in 0 blocks ==890037== indirectly lost: 0 bytes in 0 blocks ==890037== possibly lost: 0 bytes in 0 blocks ==890037== still reachable: 72 bytes in 4 blocks ==890037== suppressed: 835,506 bytes in 11,670 blocks ==890037== Reachable blocks (those to which a pointer was found) are not shown. ==890037== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==890037== ==890037== For lists of detected and suppressed errors, rerun with: -s ==890037== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)