==890769== Memcheck, a memory error detector ==890769== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==890769== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==890769== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==890769== Parent PID: 888828 ==890769== ==890769== ==890769== FILE DESCRIPTORS: 9 open (3 std) at exit. ==890769== Open file descriptor 12: ==890769== at 0xECA126D: pipe (pipe.c:29) ==890769== by 0x18A1E07D: ??? ==890769== by 0x1402F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==890769== by 0x108FD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==890769== by 0x10896D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==890769== by 0xF58DD38: PetscInitialize (pinit.c:924) ==890769== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==890769== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==890769== by 0x213670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==890769== by 0x20AE19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==890769== by 0x20EA68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==890769== by 0x20E908: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==890769== by 0x20EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==890769== by 0x209235: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==890769== ==890769== Open file descriptor 8: /dev/shm/open_mpi.0000 ==890769== at 0xECA5C0C: __open_nocancel (open64_nocancel.c:39) ==890769== by 0xEC29BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==890769== by 0xE4A9822: ??? ==890769== by 0xE4A996F: ??? ==890769== by 0x140D46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==890769== by 0x140D4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==890769== by 0x1408A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==890769== by 0x1402F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==890769== by 0x108FD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==890769== by 0x10896D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==890769== by 0xF58DD38: PetscInitialize (pinit.c:924) ==890769== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==890769== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==890769== by 0x213670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==890769== by 0x20AE19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==890769== by 0x20EA68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==890769== by 0x20E908: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==890769== by 0x20EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==890769== by 0x209235: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==890769== ==890769== Open file descriptor 116: ==890769== ==890769== ==890769== Open file descriptor 112: ==890769== ==890769== ==890769== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulation_valgrind.txt ==890769== ==890769== ==890769== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==890769== ==890769== ==890769== ==890769== HEAP SUMMARY: ==890769== in use at exit: 835,594 bytes in 11,674 blocks ==890769== total heap usage: 17,964,720 allocs, 17,953,046 frees, 30,277,328,155 bytes allocated ==890769== ==890769== LEAK SUMMARY: ==890769== definitely lost: 0 bytes in 0 blocks ==890769== indirectly lost: 0 bytes in 0 blocks ==890769== possibly lost: 0 bytes in 0 blocks ==890769== still reachable: 88 bytes in 4 blocks ==890769== suppressed: 835,506 bytes in 11,670 blocks ==890769== Reachable blocks (those to which a pointer was found) are not shown. ==890769== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==890769== ==890769== For lists of detected and suppressed errors, rerun with: -s ==890769== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)