==961655== Memcheck, a memory error detector ==961655== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==961655== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==961655== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulationBoundaryCondition -malloc_debug -malloc_dump -memory_info ==961655== Parent PID: 952536 ==961655== ==961655== ==961655== FILE DESCRIPTORS: 9 open (3 std) at exit. ==961655== Open file descriptor 12: ==961655== at 0x1226A26D: pipe (pipe.c:29) ==961655== by 0x1B43307D: ??? ==961655== by 0x1657E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==961655== by 0x11EB7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==961655== by 0x11E50D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==961655== by 0x10B47D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==961655== by 0x109B92DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==961655== by 0x109B932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==961655== by 0x1435A7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==961655== by 0x13C4A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==961655== by 0x13F200: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==961655== by 0x13F0FB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==961655== by 0x13F70F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==961655== by 0x13ACA5: main (TestCryptSimulationBoundaryCondition.cpp:18) ==961655== ==961655== Open file descriptor 8: /dev/shm/open_mpi.0000 ==961655== at 0x1226EC0C: __open_nocancel (open64_nocancel.c:39) ==961655== by 0x121F2BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==961655== by 0x109EE822: ??? ==961655== by 0x109EE96F: ??? ==961655== by 0x166236DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==961655== by 0x16623938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==961655== by 0x165D9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==961655== by 0x1657E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==961655== by 0x11EB7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==961655== by 0x11E50D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==961655== by 0x10B47D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==961655== by 0x109B92DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==961655== by 0x109B932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==961655== by 0x1435A7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==961655== by 0x13C4A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==961655== by 0x13F200: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==961655== by 0x13F0FB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==961655== by 0x13F70F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==961655== by 0x13ACA5: main (TestCryptSimulationBoundaryCondition.cpp:18) ==961655== ==961655== Open file descriptor 115: ==961655== ==961655== ==961655== Open file descriptor 112: ==961655== ==961655== ==961655== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulationBoundaryCondition_valgrind.txt ==961655== ==961655== ==961655== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==961655== ==961655== ==961655== ==961655== HEAP SUMMARY: ==961655== in use at exit: 858,115 bytes in 12,114 blocks ==961655== total heap usage: 78,651 allocs, 66,537 frees, 1,547,489,854 bytes allocated ==961655== ==961655== LEAK SUMMARY: ==961655== definitely lost: 0 bytes in 0 blocks ==961655== indirectly lost: 0 bytes in 0 blocks ==961655== possibly lost: 0 bytes in 0 blocks ==961655== still reachable: 136 bytes in 4 blocks ==961655== suppressed: 857,979 bytes in 12,110 blocks ==961655== Reachable blocks (those to which a pointer was found) are not shown. ==961655== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==961655== ==961655== For lists of detected and suppressed errors, rerun with: -s ==961655== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)