==954281== Memcheck, a memory error detector ==954281== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==954281== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==954281== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==954281== Parent PID: 952536 ==954281== ==954281== ==954281== FILE DESCRIPTORS: 9 open (3 std) at exit. ==954281== Open file descriptor 12: ==954281== at 0xF58326D: pipe (pipe.c:29) ==954281== by 0x1977407D: ??? ==954281== by 0x14D114CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==954281== by 0x1114F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==954281== by 0x110E8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==954281== by 0xFDDFD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==954281== by 0xF1892DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==954281== by 0xF18932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==954281== by 0x2E24DE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==954281== by 0x2D9039: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==954281== by 0x2DD832: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==954281== by 0x2DD6D2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==954281== by 0x2DDD69: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==954281== by 0x2D7455: main (TestNodeBasedCellPopulation.cpp:19) ==954281== ==954281== Open file descriptor 8: /dev/shm/open_mpi.0000 ==954281== at 0xF587C0C: __open_nocancel (open64_nocancel.c:39) ==954281== by 0xF50BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==954281== by 0xF1BE822: ??? ==954281== by 0xF1BE96F: ??? ==954281== by 0x14DB66DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==954281== by 0x14DB6938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==954281== by 0x14D6C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==954281== by 0x14D112DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==954281== by 0x1114F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==954281== by 0x110E8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==954281== by 0xFDDFD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==954281== by 0xF1892DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==954281== by 0xF18932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==954281== by 0x2E24DE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==954281== by 0x2D9039: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==954281== by 0x2DD832: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==954281== by 0x2DD6D2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==954281== by 0x2DDD69: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==954281== by 0x2D7455: main (TestNodeBasedCellPopulation.cpp:19) ==954281== ==954281== Open file descriptor 115: ==954281== ==954281== ==954281== Open file descriptor 112: ==954281== ==954281== ==954281== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==954281== ==954281== ==954281== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==954281== ==954281== ==954281== ==954281== HEAP SUMMARY: ==954281== in use at exit: 857,959 bytes in 12,109 blocks ==954281== total heap usage: 20,199,967 allocs, 20,187,858 frees, 2,767,325,139 bytes allocated ==954281== ==954281== LEAK SUMMARY: ==954281== definitely lost: 0 bytes in 0 blocks ==954281== indirectly lost: 0 bytes in 0 blocks ==954281== possibly lost: 0 bytes in 0 blocks ==954281== still reachable: 56 bytes in 3 blocks ==954281== suppressed: 857,903 bytes in 12,106 blocks ==954281== Reachable blocks (those to which a pointer was found) are not shown. ==954281== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==954281== ==954281== For lists of detected and suppressed errors, rerun with: -s ==954281== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)