==953812== Memcheck, a memory error detector ==953812== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==953812== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==953812== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedCellCycleModels -malloc_debug -malloc_dump -memory_info ==953812== Parent PID: 952536 ==953812== ==953812== ==953812== FILE DESCRIPTORS: 9 open (3 std) at exit. ==953812== Open file descriptor 12: ==953812== at 0xEF9426D: pipe (pipe.c:29) ==953812== by 0x1977407D: ??? ==953812== by 0x139094CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==953812== by 0xEBE1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==953812== by 0xEB7AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==953812== by 0xD871D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==953812== by 0xD6E32DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==953812== by 0xD6E332D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==953812== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==953812== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==953812== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==953812== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==953812== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==953812== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==953812== ==953812== Open file descriptor 8: /dev/shm/open_mpi.0000 ==953812== at 0xEF98C0C: __open_nocancel (open64_nocancel.c:39) ==953812== by 0xEF1CBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==953812== by 0xD718822: ??? ==953812== by 0xD71896F: ??? ==953812== by 0x139AE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==953812== by 0x139AE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==953812== by 0x13964922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==953812== by 0x139092DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==953812== by 0xEBE1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==953812== by 0xEB7AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==953812== by 0xD871D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==953812== by 0xD6E32DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==953812== by 0xD6E332D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==953812== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==953812== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==953812== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==953812== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==953812== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==953812== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==953812== ==953812== Open file descriptor 115: ==953812== ==953812== ==953812== Open file descriptor 112: ==953812== ==953812== ==953812== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModels_valgrind.txt ==953812== ==953812== ==953812== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==953812== ==953812== ==953812== ==953812== HEAP SUMMARY: ==953812== in use at exit: 857,975 bytes in 12,110 blocks ==953812== total heap usage: 4,187,946 allocs, 4,175,836 frees, 1,974,543,914 bytes allocated ==953812== ==953812== LEAK SUMMARY: ==953812== definitely lost: 0 bytes in 0 blocks ==953812== indirectly lost: 0 bytes in 0 blocks ==953812== possibly lost: 0 bytes in 0 blocks ==953812== still reachable: 72 bytes in 4 blocks ==953812== suppressed: 857,903 bytes in 12,106 blocks ==953812== Reachable blocks (those to which a pointer was found) are not shown. ==953812== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==953812== ==953812== For lists of detected and suppressed errors, rerun with: -s ==953812== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)