==953821== Memcheck, a memory error detector ==953821== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==953821== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==953821== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedSrnModels -malloc_debug -malloc_dump -memory_info ==953821== Parent PID: 952536 ==953821== ==953821== ==953821== FILE DESCRIPTORS: 9 open (3 std) at exit. ==953821== Open file descriptor 12: ==953821== at 0xED4F26D: pipe (pipe.c:29) ==953821== by 0x1977407D: ??? ==953821== by 0x138B84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==953821== by 0xE99E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==953821== by 0xE937D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==953821== by 0xD62ED38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==953821== by 0xD49E2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==953821== by 0xD49E32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==953821== by 0x12E3B1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==953821== by 0x1272FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==953821== by 0x129E8A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==953821== by 0x129D2A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==953821== by 0x12A3C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==953821== by 0x125725: main (TestOdeBasedSrnModels.cpp:19) ==953821== ==953821== Open file descriptor 8: /dev/shm/open_mpi.0000 ==953821== at 0xED53C0C: __open_nocancel (open64_nocancel.c:39) ==953821== by 0xECD7BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==953821== by 0xD4D3822: ??? ==953821== by 0xD4D396F: ??? ==953821== by 0x1395D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==953821== by 0x1395D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==953821== by 0x13913922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==953821== by 0x138B82DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==953821== by 0xE99E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==953821== by 0xE937D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==953821== by 0xD62ED38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==953821== by 0xD49E2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==953821== by 0xD49E32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==953821== by 0x12E3B1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==953821== by 0x1272FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==953821== by 0x129E8A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==953821== by 0x129D2A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==953821== by 0x12A3C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==953821== by 0x125725: main (TestOdeBasedSrnModels.cpp:19) ==953821== ==953821== Open file descriptor 115: ==953821== ==953821== ==953821== Open file descriptor 112: ==953821== ==953821== ==953821== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedSrnModels_valgrind.txt ==953821== ==953821== ==953821== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==953821== ==953821== ==953821== ==953821== HEAP SUMMARY: ==953821== in use at exit: 858,035 bytes in 12,114 blocks ==953821== total heap usage: 65,871 allocs, 53,757 frees, 1,543,938,939 bytes allocated ==953821== ==953821== LEAK SUMMARY: ==953821== definitely lost: 0 bytes in 0 blocks ==953821== indirectly lost: 0 bytes in 0 blocks ==953821== possibly lost: 0 bytes in 0 blocks ==953821== still reachable: 72 bytes in 4 blocks ==953821== suppressed: 857,963 bytes in 12,110 blocks ==953821== Reachable blocks (those to which a pointer was found) are not shown. ==953821== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==953821== ==953821== For lists of detected and suppressed errors, rerun with: -s ==953821== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)