==961703== Memcheck, a memory error detector ==961703== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==961703== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==961703== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOffLatticeCryptProjectionSimulation -malloc_debug -malloc_dump -memory_info ==961703== Parent PID: 952536 ==961703== ==961703== ==961703== FILE DESCRIPTORS: 9 open (3 std) at exit. ==961703== Open file descriptor 12: ==961703== at 0x1230F26D: pipe (pipe.c:29) ==961703== by 0x1B43307D: ??? ==961703== by 0x1657E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==961703== by 0x11E75418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==961703== by 0x11E0ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==961703== by 0x10AE2D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==961703== by 0x109B92DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==961703== by 0x109B932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==961703== by 0x135A21: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==961703== by 0x12F2CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==961703== by 0x131C72: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==961703== by 0x131B12: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==961703== by 0x1321A9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==961703== by 0x12D6F5: main (TestOffLatticeCryptProjectionSimulation.cpp:19) ==961703== ==961703== Open file descriptor 8: /dev/shm/open_mpi.0000 ==961703== at 0x12313C0C: __open_nocancel (open64_nocancel.c:39) ==961703== by 0x12297BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==961703== by 0x11D6C822: ??? ==961703== by 0x11D6C96F: ??? ==961703== by 0x166236DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==961703== by 0x16623938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==961703== by 0x165D9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==961703== by 0x1657E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==961703== by 0x11E75418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==961703== by 0x11E0ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==961703== by 0x10AE2D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==961703== by 0x109B92DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==961703== by 0x109B932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==961703== by 0x135A21: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==961703== by 0x12F2CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==961703== by 0x131C72: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==961703== by 0x131B12: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==961703== by 0x1321A9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==961703== by 0x12D6F5: main (TestOffLatticeCryptProjectionSimulation.cpp:19) ==961703== ==961703== Open file descriptor 115: ==961703== ==961703== ==961703== Open file descriptor 112: ==961703== ==961703== ==961703== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeCryptProjectionSimulation_valgrind.txt ==961703== ==961703== ==961703== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==961703== ==961703== ==961703== ==961703== HEAP SUMMARY: ==961703== in use at exit: 858,035 bytes in 12,113 blocks ==961703== total heap usage: 1,269,270 allocs, 1,257,157 frees, 1,653,655,082 bytes allocated ==961703== ==961703== LEAK SUMMARY: ==961703== definitely lost: 0 bytes in 0 blocks ==961703== indirectly lost: 0 bytes in 0 blocks ==961703== possibly lost: 0 bytes in 0 blocks ==961703== still reachable: 56 bytes in 3 blocks ==961703== suppressed: 857,979 bytes in 12,110 blocks ==961703== Reachable blocks (those to which a pointer was found) are not shown. ==961703== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==961703== ==961703== For lists of detected and suppressed errors, rerun with: -s ==961703== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)