==954492== Memcheck, a memory error detector ==954492== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==954492== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==954492== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==954492== Parent PID: 952536 ==954492== ==954492== ==954492== FILE DESCRIPTORS: 9 open (3 std) at exit. ==954492== Open file descriptor 12: ==954492== at 0xF5DB26D: pipe (pipe.c:29) ==954492== by 0x1977407D: ??? ==954492== by 0x14D114CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==954492== by 0x11238418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==954492== by 0x111D1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==954492== by 0xFEC6D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==954492== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==954492== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==954492== by 0x31148E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==954492== by 0x307A99: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==954492== by 0x30BE3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==954492== by 0x30BCDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==954492== by 0x30C373: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==954492== by 0x305EB5: main (TestOffLatticeSimulation.cpp:19) ==954492== ==954492== Open file descriptor 8: /dev/shm/open_mpi.0000 ==954492== at 0xF5DFC0C: __open_nocancel (open64_nocancel.c:39) ==954492== by 0xF563BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==954492== by 0xF12F822: ??? ==954492== by 0xF12F96F: ??? ==954492== by 0x14DB66DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==954492== by 0x14DB6938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==954492== by 0x14D6C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==954492== by 0x14D112DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==954492== by 0x11238418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==954492== by 0x111D1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==954492== by 0xFEC6D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==954492== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==954492== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==954492== by 0x31148E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==954492== by 0x307A99: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==954492== by 0x30BE3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==954492== by 0x30BCDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==954492== by 0x30C373: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==954492== by 0x305EB5: main (TestOffLatticeSimulation.cpp:19) ==954492== ==954492== Open file descriptor 115: ==954492== ==954492== ==954492== Open file descriptor 112: ==954492== ==954492== ==954492== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==954492== ==954492== ==954492== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==954492== ==954492== ==954492== ==954492== HEAP SUMMARY: ==954492== in use at exit: 857,959 bytes in 12,109 blocks ==954492== total heap usage: 12,160,618 allocs, 12,148,509 frees, 4,032,082,367 bytes allocated ==954492== ==954492== LEAK SUMMARY: ==954492== definitely lost: 0 bytes in 0 blocks ==954492== indirectly lost: 0 bytes in 0 blocks ==954492== possibly lost: 0 bytes in 0 blocks ==954492== still reachable: 56 bytes in 3 blocks ==954492== suppressed: 857,903 bytes in 12,106 blocks ==954492== Reachable blocks (those to which a pointer was found) are not shown. ==954492== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==954492== ==954492== For lists of detected and suppressed errors, rerun with: -s ==954492== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)