==961449== Memcheck, a memory error detector ==961449== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==961449== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==961449== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningNodeBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==961449== Parent PID: 952536 ==961449== ==961449== ==961449== FILE DESCRIPTORS: 9 open (3 std) at exit. ==961449== Open file descriptor 12: ==961449== at 0xF59926D: pipe (pipe.c:29) ==961449== by 0x1977407D: ??? ==961449== by 0x14D114CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==961449== by 0x11238418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==961449== by 0x111D1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==961449== by 0xFEC8D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==961449== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==961449== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==961449== by 0x12C594: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==961449== by 0x127B6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==961449== by 0x12A1B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==961449== by 0x12A058: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==961449== by 0x12A6EF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==961449== by 0x125F95: main (TestRunningNodeBasedSimulationsTutorial.cpp:19) ==961449== ==961449== Open file descriptor 8: /dev/shm/open_mpi.0000 ==961449== at 0xF59DC0C: __open_nocancel (open64_nocancel.c:39) ==961449== by 0xF521BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==961449== by 0xF12F822: ??? ==961449== by 0xF12F96F: ??? ==961449== by 0x14DB66DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==961449== by 0x14DB6938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==961449== by 0x14D6C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==961449== by 0x14D112DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==961449== by 0x11238418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==961449== by 0x111D1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==961449== by 0xFEC8D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==961449== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==961449== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==961449== by 0x12C594: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==961449== by 0x127B6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==961449== by 0x12A1B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==961449== by 0x12A058: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==961449== by 0x12A6EF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==961449== by 0x125F95: main (TestRunningNodeBasedSimulationsTutorial.cpp:19) ==961449== ==961449== Open file descriptor 115: ==961449== ==961449== ==961449== Open file descriptor 112: ==961449== ==961449== ==961449== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningNodeBasedSimulationsTutorial_valgrind.txt ==961449== ==961449== ==961449== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==961449== ==961449== ==961449== ==961449== HEAP SUMMARY: ==961449== in use at exit: 858,019 bytes in 12,113 blocks ==961449== total heap usage: 648,279 allocs, 636,166 frees, 1,926,439,003 bytes allocated ==961449== ==961449== LEAK SUMMARY: ==961449== definitely lost: 0 bytes in 0 blocks ==961449== indirectly lost: 0 bytes in 0 blocks ==961449== possibly lost: 0 bytes in 0 blocks ==961449== still reachable: 56 bytes in 3 blocks ==961449== suppressed: 857,963 bytes in 12,110 blocks ==961449== Reachable blocks (those to which a pointer was found) are not shown. ==961449== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==961449== ==961449== For lists of detected and suppressed errors, rerun with: -s ==961449== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 26 from 26)