==961471== Memcheck, a memory error detector ==961471== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==961471== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==961471== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningPottsBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==961471== Parent PID: 952536 ==961471== ==961471== ==961471== FILE DESCRIPTORS: 9 open (3 std) at exit. ==961471== Open file descriptor 12: ==961471== at 0xD85826D: pipe (pipe.c:29) ==961471== by 0x1977307D: ??? ==961471== by 0x14D104CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==961471== by 0x1114F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==961471== by 0x110E8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==961471== by 0xFDDFD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==961471== by 0xD49E2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==961471== by 0xD49E32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==961471== by 0x124670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==961471== by 0x11FBED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==961471== by 0x1221AA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==961471== by 0x12204A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==961471== by 0x1226E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==961471== by 0x11E015: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==961471== ==961471== Open file descriptor 8: /dev/shm/open_mpi.0000 ==961471== at 0xD85CC0C: __open_nocancel (open64_nocancel.c:39) ==961471== by 0xD7E0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==961471== by 0xD4D3822: ??? ==961471== by 0xD4D396F: ??? ==961471== by 0x14DB56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==961471== by 0x14DB5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==961471== by 0x14D6B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==961471== by 0x14D102DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==961471== by 0x1114F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==961471== by 0x110E8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==961471== by 0xFDDFD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==961471== by 0xD49E2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==961471== by 0xD49E32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==961471== by 0x124670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==961471== by 0x11FBED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==961471== by 0x1221AA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==961471== by 0x12204A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==961471== by 0x1226E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==961471== by 0x11E015: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==961471== ==961471== Open file descriptor 115: ==961471== ==961471== ==961471== Open file descriptor 112: ==961471== ==961471== ==961471== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningPottsBasedSimulationsTutorial_valgrind.txt ==961471== ==961471== ==961471== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==961471== ==961471== ==961471== ==961471== HEAP SUMMARY: ==961471== in use at exit: 857,959 bytes in 12,109 blocks ==961471== total heap usage: 37,227,520 allocs, 37,215,411 frees, 3,889,698,179 bytes allocated ==961471== ==961471== LEAK SUMMARY: ==961471== definitely lost: 0 bytes in 0 blocks ==961471== indirectly lost: 0 bytes in 0 blocks ==961471== possibly lost: 0 bytes in 0 blocks ==961471== still reachable: 56 bytes in 3 blocks ==961471== suppressed: 857,903 bytes in 12,106 blocks ==961471== Reachable blocks (those to which a pointer was found) are not shown. ==961471== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==961471== ==961471== For lists of detected and suppressed errors, rerun with: -s ==961471== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)