==953917== Memcheck, a memory error detector ==953917== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==953917== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==953917== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==953917== Parent PID: 952536 ==953917== ==953917== ==953917== FILE DESCRIPTORS: 9 open (3 std) at exit. ==953917== Open file descriptor 12: ==953917== at 0x10D0526D: pipe (pipe.c:29) ==953917== by 0x1977107D: ??? ==953917== by 0x14CC64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==953917== by 0x10952418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==953917== by 0x108EBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==953917== by 0xF5BFD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==953917== by 0xF4962DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==953917== by 0xF49632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==953917== by 0x12943D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==953917== by 0x124993: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==953917== by 0x126EA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==953917== by 0x126DA1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==953917== by 0x1273B5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==953917== by 0x123195: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==953917== ==953917== Open file descriptor 8: /dev/shm/open_mpi.0000 ==953917== at 0x10D09C0C: __open_nocancel (open64_nocancel.c:39) ==953917== by 0x10C8DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==953917== by 0x10849822: ??? ==953917== by 0x1084996F: ??? ==953917== by 0x14D6B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==953917== by 0x14D6B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==953917== by 0x14D21922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==953917== by 0x14CC62DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==953917== by 0x10952418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==953917== by 0x108EBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==953917== by 0xF5BFD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==953917== by 0xF4962DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==953917== by 0xF49632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==953917== by 0x12943D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==953917== by 0x124993: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==953917== by 0x126EA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==953917== by 0x126DA1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==953917== by 0x1273B5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==953917== by 0x123195: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==953917== ==953917== Open file descriptor 115: ==953917== ==953917== ==953917== Open file descriptor 112: ==953917== ==953917== ==953917== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticBoxDomainPdeModifier_valgrind.txt ==953917== ==953917== ==953917== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==953917== ==953917== ==953917== ==953917== HEAP SUMMARY: ==953917== in use at exit: 857,959 bytes in 12,109 blocks ==953917== total heap usage: 7,555,736 allocs, 7,543,627 frees, 2,379,113,805 bytes allocated ==953917== ==953917== LEAK SUMMARY: ==953917== definitely lost: 0 bytes in 0 blocks ==953917== indirectly lost: 0 bytes in 0 blocks ==953917== possibly lost: 0 bytes in 0 blocks ==953917== still reachable: 56 bytes in 3 blocks ==953917== suppressed: 857,903 bytes in 12,106 blocks ==953917== Reachable blocks (those to which a pointer was found) are not shown. ==953917== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==953917== ==953917== For lists of detected and suppressed errors, rerun with: -s ==953917== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)