==961701== Memcheck, a memory error detector ==961701== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==961701== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==961701== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVertexBasedCellPopulationForCrypt -malloc_debug -malloc_dump -memory_info ==961701== Parent PID: 952536 ==961701== ==961701== ==961701== FILE DESCRIPTORS: 9 open (3 std) at exit. ==961701== Open file descriptor 12: ==961701== at 0x1222826D: pipe (pipe.c:29) ==961701== by 0x1B43307D: ??? ==961701== by 0x1657E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==961701== by 0x11E75418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==961701== by 0x11E0ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==961701== by 0x10AE2D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==961701== by 0x109B92DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==961701== by 0x109B932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==961701== by 0x11D8AF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==961701== by 0x1190F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==961701== by 0x11B488: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==961701== by 0x11B383: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==961701== by 0x11B997: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==961701== by 0x1178F5: main (TestVertexBasedCellPopulationForCrypt.cpp:18) ==961701== ==961701== Open file descriptor 8: /dev/shm/open_mpi.0000 ==961701== at 0x1222CC0C: __open_nocancel (open64_nocancel.c:39) ==961701== by 0x121B0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==961701== by 0x11D6C822: ??? ==961701== by 0x11D6C96F: ??? ==961701== by 0x166236DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==961701== by 0x16623938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==961701== by 0x165D9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==961701== by 0x1657E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==961701== by 0x11E75418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==961701== by 0x11E0ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==961701== by 0x10AE2D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==961701== by 0x109B92DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==961701== by 0x109B932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==961701== by 0x11D8AF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==961701== by 0x1190F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==961701== by 0x11B488: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==961701== by 0x11B383: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==961701== by 0x11B997: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==961701== by 0x1178F5: main (TestVertexBasedCellPopulationForCrypt.cpp:18) ==961701== ==961701== Open file descriptor 115: ==961701== ==961701== ==961701== Open file descriptor 112: ==961701== ==961701== ==961701== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexBasedCellPopulationForCrypt_valgrind.txt ==961701== ==961701== ==961701== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==961701== ==961701== ==961701== ==961701== HEAP SUMMARY: ==961701== in use at exit: 858,115 bytes in 12,114 blocks ==961701== total heap usage: 62,540 allocs, 50,426 frees, 1,543,428,025 bytes allocated ==961701== ==961701== LEAK SUMMARY: ==961701== definitely lost: 0 bytes in 0 blocks ==961701== indirectly lost: 0 bytes in 0 blocks ==961701== possibly lost: 0 bytes in 0 blocks ==961701== still reachable: 136 bytes in 4 blocks ==961701== suppressed: 857,979 bytes in 12,110 blocks ==961701== Reachable blocks (those to which a pointer was found) are not shown. ==961701== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==961701== ==961701== For lists of detected and suppressed errors, rerun with: -s ==961701== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)