==497954== Memcheck, a memory error detector ==497954== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==497954== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==497954== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==497954== Parent PID: 496273 ==497954== ==497954== ==497954== FILE DESCRIPTORS: 9 open (3 std) at exit. ==497954== Open file descriptor 12: ==497954== at 0xDBE626D: pipe (pipe.c:29) ==497954== by 0x196B107D: ??? ==497954== by 0x14CBE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==497954== by 0x1149F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==497954== by 0x11438D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==497954== by 0x1012FD38: PetscInitialize (pinit.c:924) ==497954== by 0xD4A22DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==497954== by 0xD4A232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==497954== by 0x132B46: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==497954== by 0x12BE43: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==497954== by 0x12E998: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==497954== by 0x12E893: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==497954== by 0x12EEA7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==497954== by 0x12A645: main (TestCaUpdateRules.cpp:18) ==497954== ==497954== Open file descriptor 8: /dev/shm/open_mpi.0000 ==497954== at 0xDBEAC0C: __open_nocancel (open64_nocancel.c:39) ==497954== by 0xDB6EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==497954== by 0xD4D7822: ??? ==497954== by 0xD4D796F: ??? ==497954== by 0x14D636DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==497954== by 0x14D63938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==497954== by 0x14D19922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==497954== by 0x14CBE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==497954== by 0x1149F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==497954== by 0x11438D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==497954== by 0x1012FD38: PetscInitialize (pinit.c:924) ==497954== by 0xD4A22DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==497954== by 0xD4A232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==497954== by 0x132B46: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==497954== by 0x12BE43: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==497954== by 0x12E998: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==497954== by 0x12E893: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==497954== by 0x12EEA7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==497954== by 0x12A645: main (TestCaUpdateRules.cpp:18) ==497954== ==497954== Open file descriptor 115: ==497954== ==497954== ==497954== Open file descriptor 110: ==497954== ==497954== ==497954== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==497954== ==497954== ==497954== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==497954== ==497954== ==497954== ==497954== HEAP SUMMARY: ==497954== in use at exit: 995,580 bytes in 13,914 blocks ==497954== total heap usage: 68,394 allocs, 54,480 frees, 1,572,262,558 bytes allocated ==497954== ==497954== LEAK SUMMARY: ==497954== definitely lost: 0 bytes in 0 blocks ==497954== indirectly lost: 0 bytes in 0 blocks ==497954== possibly lost: 0 bytes in 0 blocks ==497954== still reachable: 56 bytes in 3 blocks ==497954== suppressed: 995,524 bytes in 13,911 blocks ==497954== Reachable blocks (those to which a pointer was found) are not shown. ==497954== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==497954== ==497954== For lists of detected and suppressed errors, rerun with: -s ==497954== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)