==512404== Memcheck, a memory error detector ==512404== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==512404== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==512404== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==512404== Parent PID: 496273 ==512404== ==512404== ==512404== FILE DESCRIPTORS: 9 open (3 std) at exit. ==512404== Open file descriptor 12: ==512404== at 0x111EA26D: pipe (pipe.c:29) ==512404== by 0x1B37207D: ??? ==512404== by 0x165854CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==512404== by 0x12E46418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512404== by 0x12DDFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512404== by 0x11AD6D38: PetscInitialize (pinit.c:924) ==512404== by 0x109BF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==512404== by 0x109BF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==512404== by 0x23B368: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==512404== by 0x231839: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==512404== by 0x235F6A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==512404== by 0x235E0A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==512404== by 0x2364A1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==512404== by 0x22FC55: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==512404== ==512404== Open file descriptor 8: /dev/shm/open_mpi.0000 ==512404== at 0x111EEC0C: __open_nocancel (open64_nocancel.c:39) ==512404== by 0x11172BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==512404== by 0x109F4822: ??? ==512404== by 0x109F496F: ??? ==512404== by 0x1662A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==512404== by 0x1662A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==512404== by 0x165E0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==512404== by 0x165852DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==512404== by 0x12E46418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512404== by 0x12DDFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512404== by 0x11AD6D38: PetscInitialize (pinit.c:924) ==512404== by 0x109BF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==512404== by 0x109BF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==512404== by 0x23B368: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==512404== by 0x231839: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==512404== by 0x235F6A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==512404== by 0x235E0A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==512404== by 0x2364A1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==512404== by 0x22FC55: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==512404== ==512404== Open file descriptor 115: ==512404== ==512404== ==512404== Open file descriptor 110: ==512404== ==512404== ==512404== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==512404== ==512404== ==512404== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==512404== ==512404== ==512404== ==512404== HEAP SUMMARY: ==512404== in use at exit: 995,540 bytes in 13,910 blocks ==512404== total heap usage: 6,320,570 allocs, 6,306,660 frees, 2,290,575,641 bytes allocated ==512404== ==512404== LEAK SUMMARY: ==512404== definitely lost: 0 bytes in 0 blocks ==512404== indirectly lost: 0 bytes in 0 blocks ==512404== possibly lost: 0 bytes in 0 blocks ==512404== still reachable: 56 bytes in 3 blocks ==512404== suppressed: 995,484 bytes in 13,907 blocks ==512404== Reachable blocks (those to which a pointer was found) are not shown. ==512404== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==512404== ==512404== For lists of detected and suppressed errors, rerun with: -s ==512404== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)