==514802== Memcheck, a memory error detector ==514802== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==514802== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==514802== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestMonodomainProblem -malloc_debug -malloc_dump -memory_info ==514802== Parent PID: 496273 ==514802== ==514802== Warning: invalid file descriptor -1 in syscall close() ==514802== ==514802== FILE DESCRIPTORS: 9 open (3 std) at exit. ==514802== Open file descriptor 12: ==514802== at 0xC10626D: pipe (pipe.c:29) ==514802== by 0x1432807D: ??? ==514802== by 0xFFEE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==514802== by 0xB9F4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==514802== by 0xB98DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==514802== by 0xA2CFD38: PetscInitialize (pinit.c:924) ==514802== by 0xA13C2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==514802== by 0xA13C32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==514802== by 0x14A2B6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==514802== by 0x14182D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==514802== by 0x144A20: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==514802== by 0x1448C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==514802== by 0x144F57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==514802== by 0x13FC05: main (TestMonodomainProblem.cpp:19) ==514802== ==514802== Open file descriptor 8: /dev/shm/open_mpi.0000 ==514802== at 0xC10AC0C: __open_nocancel (open64_nocancel.c:39) ==514802== by 0xC08EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==514802== by 0xA171822: ??? ==514802== by 0xA17196F: ??? ==514802== by 0x100936DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==514802== by 0x10093938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==514802== by 0x10049922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==514802== by 0xFFEE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==514802== by 0xB9F4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==514802== by 0xB98DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==514802== by 0xA2CFD38: PetscInitialize (pinit.c:924) ==514802== by 0xA13C2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==514802== by 0xA13C32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==514802== by 0x14A2B6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==514802== by 0x14182D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==514802== by 0x144A20: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==514802== by 0x1448C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==514802== by 0x144F57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==514802== by 0x13FC05: main (TestMonodomainProblem.cpp:19) ==514802== ==514802== Open file descriptor 115: ==514802== ==514802== ==514802== Open file descriptor 110: ==514802== ==514802== ==514802== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMonodomainProblem_valgrind.txt ==514802== ==514802== ==514802== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==514802== ==514802== ==514802== ==514802== HEAP SUMMARY: ==514802== in use at exit: 995,988 bytes in 13,919 blocks ==514802== total heap usage: 6,630,832 allocs, 6,616,913 frees, 4,251,700,440 bytes allocated ==514802== ==514802== LEAK SUMMARY: ==514802== definitely lost: 0 bytes in 0 blocks ==514802== indirectly lost: 0 bytes in 0 blocks ==514802== possibly lost: 0 bytes in 0 blocks ==514802== still reachable: 24 bytes in 2 blocks ==514802== suppressed: 995,964 bytes in 13,917 blocks ==514802== Reachable blocks (those to which a pointer was found) are not shown. ==514802== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==514802== ==514802== For lists of detected and suppressed errors, rerun with: -s ==514802== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 128 from 34)