==498157== Memcheck, a memory error detector ==498157== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==498157== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==498157== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithParticles -malloc_debug -malloc_dump -memory_info ==498157== Parent PID: 496273 ==498157== ==498157== ==498157== FILE DESCRIPTORS: 9 open (3 std) at exit. ==498157== Open file descriptor 12: ==498157== at 0xF92A26D: pipe (pipe.c:29) ==498157== by 0x196B107D: ??? ==498157== by 0x14CBC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==498157== by 0x11586418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498157== by 0x1151FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498157== by 0x10216D38: PetscInitialize (pinit.c:924) ==498157== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==498157== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==498157== by 0x2E2C1E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==498157== by 0x2D9419: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==498157== by 0x2DDDE4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==498157== by 0x2DDC84: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==498157== by 0x2DE31B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==498157== by 0x2D7835: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==498157== ==498157== Open file descriptor 8: /dev/shm/open_mpi.0000 ==498157== at 0xF92EC0C: __open_nocancel (open64_nocancel.c:39) ==498157== by 0xF8B2BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==498157== by 0xF134822: ??? ==498157== by 0xF13496F: ??? ==498157== by 0x14D616DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==498157== by 0x14D61938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==498157== by 0x14D17922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==498157== by 0x14CBC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==498157== by 0x11586418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498157== by 0x1151FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498157== by 0x10216D38: PetscInitialize (pinit.c:924) ==498157== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==498157== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==498157== by 0x2E2C1E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==498157== by 0x2D9419: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==498157== by 0x2DDDE4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==498157== by 0x2DDC84: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==498157== by 0x2DE31B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==498157== by 0x2D7835: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==498157== ==498157== Open file descriptor 115: ==498157== ==498157== ==498157== Open file descriptor 110: ==498157== ==498157== ==498157== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithParticles_valgrind.txt ==498157== ==498157== ==498157== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==498157== ==498157== ==498157== ==498157== HEAP SUMMARY: ==498157== in use at exit: 995,580 bytes in 13,914 blocks ==498157== total heap usage: 116,251 allocs, 102,337 frees, 1,579,290,037 bytes allocated ==498157== ==498157== LEAK SUMMARY: ==498157== definitely lost: 0 bytes in 0 blocks ==498157== indirectly lost: 0 bytes in 0 blocks ==498157== possibly lost: 0 bytes in 0 blocks ==498157== still reachable: 56 bytes in 3 blocks ==498157== suppressed: 995,524 bytes in 13,911 blocks ==498157== Reachable blocks (those to which a pointer was found) are not shown. ==498157== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==498157== ==498157== For lists of detected and suppressed errors, rerun with: -s ==498157== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)